LINC01714

Summary

LINC01714 (long intergenic non-protein coding RNA 1714, HGNC:52501) is a long non-coding RNA gene on chromosome 1p36.23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52501
Approved symbol	LINC01714
Name	long intergenic non-protein coding RNA 1714
Location	1p36.23
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000227634
Ensembl biotype	lncRNA
Entrez	102724539
RNAcentral	URS0000394A79 — lncRNA, 497 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 42 — 42 lncRNA

ENST00000452982, ENST00000635451, ENST00000670361, ENST00000684850, ENST00000777674, ENST00000777791, ENST00000777792, ENST00000777793, ENST00000777794, ENST00000777795, ENST00000777796, ENST00000777797, ENST00000777798, ENST00000777799, ENST00000777800, ENST00000777801, ENST00000777802, ENST00000777803, ENST00000777804, ENST00000777805, ENST00000777806, ENST00000777807, ENST00000777808, ENST00000777809, ENST00000777810, ENST00000777811, ENST00000777812, ENST00000777813, ENST00000777814, ENST00000777815, ENST00000777816, ENST00000777817, ENST00000777818, ENST00000777819, ENST00000777820, ENST00000777821, ENST00000777822, ENST00000777823, ENST00000777824, ENST00000777825, ENST00000778536, ENST00000778537

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000452982 — 5 exons

Exon	Start	End
ENSE00001668066	8210487	8210595
ENSE00001688895	8214625	8214678
ENSE00003785883	8208667	8208873
ENSE00004146835	8215079	8215242
ENSE00004146870	8202356	8202460

Expression profiles

Bgee: expression breadth broad, 99 present calls, max score 86.37.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0973 / max 11.4181, expressed in 46 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
463	0.0973	46

Top tissues by expression

99 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.37	gold quality
mucosa of stomach	UBERON:0001199	71.81	gold quality
liver	UBERON:0002107	63.74	gold quality
right lobe of liver	UBERON:0001114	63.55	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	61.95	gold quality
lymph node	UBERON:0000029	60.97	gold quality
ganglionic eminence	UBERON:0004023	60.93	gold quality
lower esophagus muscularis layer	UBERON:0035833	57.14	gold quality
lower esophagus	UBERON:0013473	57.13	gold quality
prefrontal cortex	UBERON:0000451	56.50	gold quality
islet of Langerhans	UBERON:0000006	56.06	gold quality
blood	UBERON:0000178	55.71	gold quality
right coronary artery	UBERON:0001625	55.61	gold quality
tonsil	UBERON:0002372	55.43	silver quality
esophagus	UBERON:0001043	55.31	gold quality
monocyte	CL:0000576	53.75	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	53.39	gold quality
cortex of kidney	UBERON:0001225	53.33	gold quality
gall bladder	UBERON:0002110	52.56	gold quality
descending thoracic aorta	UBERON:0002345	52.47	gold quality
pancreas	UBERON:0001264	52.28	gold quality
calcaneal tendon	UBERON:0003701	52.26	silver quality
kidney	UBERON:0002113	51.95	gold quality
muscle of leg	UBERON:0001383	51.24	gold quality
gastrocnemius	UBERON:0001388	51.04	gold quality
placenta	UBERON:0001987	50.64	gold quality
adult mammalian kidney	UBERON:0000082	50.23	gold quality
duodenum	UBERON:0002114	49.36	gold quality
body of pancreas	UBERON:0001150	49.00	gold quality
tibial artery	UBERON:0007610	48.82	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.28

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.