LINC01723

Summary

LINC01723 (long intergenic non-protein coding RNA 1723, HGNC:52511) is a long non-coding RNA gene on chromosome 20p12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52511
Approved symbol	LINC01723
Name	long intergenic non-protein coding RNA 1723
Location	20p12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000234265
Ensembl biotype	lncRNA
Entrez	100505515
RNAcentral	URS000075D4FE — lncRNA, 606 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 40 — 40 lncRNA

ENST00000432244, ENST00000651029, ENST00000654168, ENST00000655843, ENST00000658457, ENST00000658737, ENST00000660733, ENST00000660848, ENST00000661302, ENST00000664230, ENST00000666864, ENST00000668019, ENST00000669657, ENST00000669978, ENST00000670547, ENST00000671262, ENST00000716720, ENST00000716721, ENST00000716722, ENST00000716723, ENST00000716724, ENST00000724528, ENST00000724529, ENST00000724530, ENST00000724531, ENST00000724532, ENST00000724533, ENST00000724534, ENST00000724535, ENST00000724536, ENST00000724537, ENST00000724538, ENST00000724539, ENST00000724540, ENST00000724541, ENST00000724542, ENST00000724543, ENST00000724544, ENST00000724545, ENST00000724546

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000432244 — 2 exons

Exon	Start	End
ENSE00001717782	12950338	12950761
ENSE00004030536	12951451	12951627

Expression profiles

Bgee: expression breadth broad, 62 present calls, max score 87.96.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0403 / max 39.6955, expressed in 3 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
183597	0.0291	3
183596	0.0112	3

Top tissues by expression

178 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	87.96	gold quality
right testis	UBERON:0004534	87.28	gold quality
sperm	CL:0000019	86.99	gold quality
testis	UBERON:0000473	84.40	gold quality
left ventricle myocardium	UBERON:0006566	82.44	gold quality
cardiac muscle of right atrium	UBERON:0003379	82.24	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.54	gold quality
kidney epithelium	UBERON:0004819	76.15	gold quality
islet of Langerhans	UBERON:0000006	75.48	gold quality
ileal mucosa	UBERON:0000331	71.76	silver quality
upper arm skin	UBERON:0004263	68.94	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	67.33	gold quality
quadriceps femoris	UBERON:0001377	66.72	gold quality
vastus lateralis	UBERON:0001379	66.32	gold quality
tibialis anterior	UBERON:0001385	66.26	silver quality
pancreatic ductal cell	CL:0002079	65.24	silver quality
myocardium	UBERON:0002349	65.14	gold quality
nasal cavity epithelium	UBERON:0005384	63.03	gold quality
deltoid	UBERON:0001476	62.15	gold quality
metanephros	UBERON:0000081	59.18	gold quality
superficial temporal artery	UBERON:0001614	58.81	gold quality
epithelium of nasopharynx	UBERON:0001951	58.46	gold quality
parotid gland	UBERON:0001831	58.37	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	57.95	gold quality
skeletal muscle tissue	UBERON:0001134	57.83	gold quality
heart right ventricle	UBERON:0002080	56.67	gold quality
vena cava	UBERON:0004087	56.57	gold quality
adult organism	UBERON:0007023	56.09	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	55.63	gold quality
prefrontal cortex	UBERON:0000451	55.37	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.48

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.