LINC01733

Summary

LINC01733 (long intergenic non-protein coding RNA 1733, HGNC:52521) is a long non-coding RNA gene on chromosome 20p11.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52521
Approved symbol	LINC01733
Name	long intergenic non-protein coding RNA 1733
Location	20p11.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226203
Ensembl biotype	lncRNA
Entrez	101926955
RNAcentral	URS000075C2A5 — lncRNA, 4619 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000449316, ENST00000745739

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000449316 — 4 exons

Exon	Start	End
ENSE00001605710	25956086	25956210
ENSE00001623186	25965003	25969288
ENSE00001637826	25955795	25955869
ENSE00001762120	25963062	25963196

Expression profiles

Bgee: expression breadth broad, 25 present calls, max score 74.02.

Top tissues by expression

25 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	74.02	gold quality
ganglionic eminence	UBERON:0004023	56.56	silver quality
blood	UBERON:0000178	50.76	gold quality
monocyte	CL:0000576	49.78	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	49.46	gold quality
body of stomach	UBERON:0001161	48.71	gold quality
duodenum	UBERON:0002114	46.49	silver quality
tibial artery	UBERON:0007610	44.27	silver quality
nucleus accumbens	UBERON:0001882	42.80	silver quality
subcutaneous adipose tissue	UBERON:0002190	42.79	silver quality
esophagus mucosa	UBERON:0002469	42.29	silver quality
putamen	UBERON:0001874	42.27	silver quality
fallopian tube	UBERON:0003889	41.46	silver quality
skin of abdomen	UBERON:0001416	41.06	silver quality
omental fat pad	UBERON:0010414	40.48	silver quality
testis	UBERON:0000473	39.55	gold quality
skin of leg	UBERON:0001511	38.72	silver quality
right testis	UBERON:0004534	38.44	gold quality
left testis	UBERON:0004533	37.99	gold quality
muscle layer of sigmoid colon	UBERON:0035805	37.73	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	37.66	silver quality
right frontal lobe	UBERON:0002810	37.52	gold quality
vagina	UBERON:0000996	36.65	silver quality
hypothalamus	UBERON:0001898	34.58	silver quality
lower esophagus muscularis layer	UBERON:0035833	32.80	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.43

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.