LINC01738

Summary

LINC01738 (long intergenic non-protein coding RNA 1738, HGNC:52526) is a long non-coding RNA gene on chromosome 1p33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52526
Approved symbol	LINC01738
Name	long intergenic non-protein coding RNA 1738
Location	1p33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000227947
Ensembl biotype	lncRNA
Entrez	107984953
RNAcentral	URS0002A1BB1A — lncRNA, 2158 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000454285, ENST00000785599, ENST00000785600

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000454285 — 3 exons

Exon	Start	End
ENSE00001656570	47688463	47688582
ENSE00001693085	47694195	47694234
ENSE00001730595	47702729	47704029

Expression profiles

Bgee: expression breadth broad, 75 present calls, max score 60.11.

Top tissues by expression

75 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ventricular zone	UBERON:0003053	60.11	silver quality
ganglionic eminence	UBERON:0004023	59.40	gold quality
caudate nucleus	UBERON:0001873	57.10	gold quality
mucosa of transverse colon	UBERON:0004991	56.18	gold quality
right coronary artery	UBERON:0001625	55.90	gold quality
hindlimb stylopod muscle	UBERON:0004252	55.85	silver quality
tibial nerve	UBERON:0001323	55.55	gold quality
nucleus accumbens	UBERON:0001882	54.54	gold quality
rectum	UBERON:0001052	52.75	gold quality
placenta	UBERON:0001987	52.35	gold quality
heart left ventricle	UBERON:0002084	52.21	silver quality
endometrium	UBERON:0001295	51.97	gold quality
cortex of kidney	UBERON:0001225	51.31	gold quality
prefrontal cortex	UBERON:0000451	51.12	silver quality
muscle of leg	UBERON:0001383	49.61	silver quality
anterior cingulate cortex	UBERON:0009835	49.40	gold quality
urinary bladder	UBERON:0001255	49.36	gold quality
myometrium	UBERON:0001296	48.65	silver quality
tibial artery	UBERON:0007610	48.61	gold quality
popliteal artery	UBERON:0002250	48.57	gold quality
blood	UBERON:0000178	47.69	silver quality
gastrocnemius	UBERON:0001388	47.50	silver quality
minor salivary gland	UBERON:0001830	47.39	gold quality
duodenum	UBERON:0002114	47.30	silver quality
putamen	UBERON:0001874	47.10	gold quality
descending thoracic aorta	UBERON:0002345	47.10	gold quality
kidney	UBERON:0002113	46.94	gold quality
ascending aorta	UBERON:0001496	46.84	gold quality
thoracic aorta	UBERON:0001515	46.79	gold quality
monocyte	CL:0000576	45.74	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.