LINC01743

Summary

LINC01743 (long intergenic non-protein coding RNA 1743, HGNC:52531) is a long non-coding RNA gene on chromosome 1q44.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52531
Approved symbol	LINC01743
Name	long intergenic non-protein coding RNA 1743
Location	1q44
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000242042
Ensembl biotype	lncRNA
Entrez	255654
RNAcentral	URS00002D72F2 — lncRNA, 964 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000366308

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000366308 — 3 exons

Exon	Start	End
ENSE00001614505	246516039	246516830
ENSE00001661005	246517699	246517779
ENSE00001705461	246524197	246524287

Expression profiles

Bgee: expression breadth broad, 60 present calls, max score 93.58.

Top tissues by expression

171 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	93.58	gold quality
buccal mucosa cell	CL:0002336	74.59	gold quality
left testis	UBERON:0004533	68.08	gold quality
right testis	UBERON:0004534	67.52	gold quality
tendon of biceps brachii	UBERON:0008188	66.50	gold quality
testis	UBERON:0000473	66.08	gold quality
tendon	UBERON:0000043	66.02	gold quality
myocardium	UBERON:0002349	58.55	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	58.08	gold quality
vena cava	UBERON:0004087	57.78	gold quality
ganglionic eminence	UBERON:0004023	56.98	gold quality
lateral nuclear group of thalamus	UBERON:0002736	56.17	gold quality
medial globus pallidus	UBERON:0002477	56.05	gold quality
heart right ventricle	UBERON:0002080	55.23	gold quality
cartilage tissue	UBERON:0002418	54.97	gold quality
globus pallidus	UBERON:0001875	54.55	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	54.48	gold quality
sperm	CL:0000019	53.45	gold quality
metanephros	UBERON:0000081	53.10	gold quality
lateral globus pallidus	UBERON:0002476	52.98	gold quality
deltoid	UBERON:0001476	50.76	gold quality
oviduct epithelium	UBERON:0004804	50.53	gold quality
substantia nigra pars compacta	UBERON:0001965	49.64	gold quality
gall bladder	UBERON:0002110	48.69	gold quality
muscle of leg	UBERON:0001383	48.68	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	48.33	gold quality
fallopian tube	UBERON:0003889	48.23	gold quality
Brodmann (1909) area 46	UBERON:0006483	47.99	gold quality
gastrocnemius	UBERON:0001388	47.61	gold quality
biceps brachii	UBERON:0001507	47.34	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.97

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.