LINC01744

Summary

LINC01744 (long intergenic non-protein coding RNA 1744, HGNC:52532) is a long non-coding RNA gene on chromosome 1q42.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52532
Approved symbol	LINC01744
Name	long intergenic non-protein coding RNA 1744
Location	1q42.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236497
Ensembl biotype	lncRNA
Entrez	101927683
RNAcentral	URS00002B461D — lncRNA, 2042 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000457698, ENST00000658542, ENST00000659372, ENST00000739597, ENST00000739598

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000457698 — 4 exons

Exon	Start	End
ENSE00001604976	232735701	232735750
ENSE00001647984	232727254	232728689
ENSE00001668331	232742367	232742715
ENSE00001772380	232730575	232730781

Expression profiles

Bgee: expression breadth broad, 22 present calls, max score 82.17.

Top tissues by expression

22 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.17	gold quality
left testis	UBERON:0004533	68.46	gold quality
testis	UBERON:0000473	68.36	gold quality
right testis	UBERON:0004534	67.11	gold quality
multicellular organism	UBERON:0000468	63.03	gold quality
putamen	UBERON:0001874	61.12	gold quality
cortical plate	UBERON:0005343	58.14	silver quality
islet of Langerhans	UBERON:0000006	56.25	gold quality
caudate nucleus	UBERON:0001873	56.17	gold quality
hindlimb stylopod muscle	UBERON:0004252	53.98	silver quality
gastrocnemius	UBERON:0001388	53.82	gold quality
prefrontal cortex	UBERON:0000451	51.98	silver quality
urinary bladder	UBERON:0001255	50.86	silver quality
skin of leg	UBERON:0001511	50.60	gold quality
liver	UBERON:0002107	49.64	silver quality
blood	UBERON:0000178	47.58	silver quality
myometrium	UBERON:0001296	47.32	silver quality
right lobe of liver	UBERON:0001114	45.19	silver quality
tibial nerve	UBERON:0001323	44.61	gold quality
Ammon’s horn	UBERON:0001954	40.23	silver quality
prostate gland	UBERON:0002367	38.80	silver quality
body of stomach	UBERON:0001161	36.12	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.