LINC01746

Summary

LINC01746 (long intergenic non-protein coding RNA 1746, HGNC:52534) is a long non-coding RNA gene on chromosome 20q11.23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52534
Approved symbol	LINC01746
Name	long intergenic non-protein coding RNA 1746
Location	20q11.23
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000274469
Ensembl biotype	lncRNA
Entrez	105372608
RNAcentral	URS00026A274F — lncRNA, 1816 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 9 lncRNA

ENST00000621390, ENST00000653260, ENST00000813503, ENST00000813504, ENST00000813505, ENST00000813506, ENST00000813507, ENST00000813508, ENST00000813509

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000621390 — 4 exons

Exon	Start	End
ENSE00003721297	37583867	37583935
ENSE00003722031	37571894	37571965
ENSE00003740234	37577100	37577211
ENSE00003745253	37571103	37571298

Expression profiles

Bgee: expression breadth broad, 18 present calls, max score 58.80.

Top tissues by expression

18 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
blood	UBERON:0000178	58.80	gold quality
right testis	UBERON:0004534	56.28	gold quality
monocyte	CL:0000576	54.50	gold quality
testis	UBERON:0000473	53.95	gold quality
left testis	UBERON:0004533	53.92	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	53.46	gold quality
body of stomach	UBERON:0001161	48.08	gold quality
right frontal lobe	UBERON:0002810	46.52	gold quality
gastrocnemius	UBERON:0001388	45.16	gold quality
spleen	UBERON:0002106	41.90	silver quality
transverse colon	UBERON:0001157	40.98	silver quality
skin of leg	UBERON:0001511	40.89	gold quality
adult mammalian kidney	UBERON:0000082	40.58	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	39.50	silver quality
subcutaneous adipose tissue	UBERON:0002190	37.83	gold quality
esophagus mucosa	UBERON:0002469	37.04	silver quality
adenohypophysis	UBERON:0002196	36.58	silver quality
omental fat pad	UBERON:0010414	35.76	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.30

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.