LINC01752

Summary

LINC01752 (long intergenic non-protein coding RNA 1752, HGNC:52540) is a long non-coding RNA gene on chromosome 20p12.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52540
Approved symbol	LINC01752
Name	long intergenic non-protein coding RNA 1752
Location	20p12.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224961
Ensembl biotype	lncRNA
Entrez	101929395
RNAcentral	URS000075CDB9 — lncRNA, 499 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000417299, ENST00000603462, ENST00000654385, ENST00000667822, ENST00000716704, ENST00000716705, ENST00000716706

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000417299 — 4 exons

Exon	Start	End
ENSE00001591895	10753031	10753145
ENSE00003849837	10696949	10697127
ENSE00004030462	10697462	10697579
ENSE00004030464	10753585	10754027

Expression profiles

Bgee: expression breadth ubiquitous, 125 present calls, max score 87.58.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0587 / max 14.3065, expressed in 21 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
183571	0.0587	21

Top tissues by expression

125 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
rectum	UBERON:0001052	87.58	gold quality
mucosa of transverse colon	UBERON:0004991	87.28	gold quality
colonic epithelium	UBERON:0000397	77.57	gold quality
transverse colon	UBERON:0001157	76.16	gold quality
lower esophagus mucosa	UBERON:0035834	72.65	gold quality
esophagus mucosa	UBERON:0002469	71.05	gold quality
prostate gland	UBERON:0002367	70.52	gold quality
bone marrow cell	CL:0002092	70.04	silver quality
left coronary artery	UBERON:0001626	67.82	gold quality
colon	UBERON:0001155	67.08	gold quality
tibial artery	UBERON:0007610	66.84	gold quality
popliteal artery	UBERON:0002250	66.83	gold quality
right coronary artery	UBERON:0001625	66.64	gold quality
vagina	UBERON:0000996	65.92	gold quality
skin of abdomen	UBERON:0001416	65.38	gold quality
zone of skin	UBERON:0000014	64.87	gold quality
skin of leg	UBERON:0001511	64.39	gold quality
descending thoracic aorta	UBERON:0002345	64.13	gold quality
intestine	UBERON:0000160	63.91	gold quality
ventricular zone	UBERON:0003053	62.58	gold quality
bone marrow	UBERON:0002371	62.19	silver quality
right uterine tube	UBERON:0001302	61.91	gold quality
esophagus	UBERON:0001043	61.84	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	61.79	gold quality
ganglionic eminence	UBERON:0004023	60.79	gold quality
urinary bladder	UBERON:0001255	60.35	gold quality
placenta	UBERON:0001987	59.92	gold quality
thoracic aorta	UBERON:0001515	59.00	gold quality
tonsil	UBERON:0002372	58.99	gold quality
ascending aorta	UBERON:0001496	58.77	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.32

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.