LINC01760

Summary

LINC01760 (long intergenic non-protein coding RNA 1760, HGNC:52549) is a long non-coding RNA gene on chromosome 1p21.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52549
Approved symbol	LINC01760
Name	long intergenic non-protein coding RNA 1760
Location	1p21.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000228504
Ensembl biotype	lncRNA
Entrez	100996630
RNAcentral	URS0000A763B6 — lncRNA, 387 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 12 lncRNA

ENST00000423410, ENST00000716971, ENST00000716972, ENST00000716973, ENST00000716974, ENST00000716975, ENST00000716976, ENST00000716977, ENST00000716978, ENST00000716979, ENST00000716980, ENST00000716981

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000423410 — 2 exons

Exon	Start	End
ENSE00001732630	95318148	95318274
ENSE00001789822	95310915	95311193

Expression profiles

Bgee: expression breadth broad, 72 present calls, max score 97.69.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0100 / max 7.6684, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
13430	0.0100	3

Top tissues by expression

72 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	97.69	gold quality
left testis	UBERON:0004533	94.93	gold quality
testis	UBERON:0000473	94.37	gold quality
right testis	UBERON:0004534	93.87	gold quality
hindlimb stylopod muscle	UBERON:0004252	68.23	gold quality
monocyte	CL:0000576	58.97	gold quality
multicellular organism	UBERON:0000468	58.54	gold quality
gastrocnemius	UBERON:0001388	56.98	gold quality
vermiform appendix	UBERON:0001154	55.77	gold quality
blood	UBERON:0000178	54.46	gold quality
body of pancreas	UBERON:0001150	53.63	gold quality
endometrium	UBERON:0001295	51.11	gold quality
thoracic mammary gland	UBERON:0005200	50.71	gold quality
prefrontal cortex	UBERON:0000451	49.99	gold quality
heart left ventricle	UBERON:0002084	49.93	gold quality
heart	UBERON:0000948	49.29	gold quality
right atrium auricular region	UBERON:0006631	49.16	gold quality
right lobe of liver	UBERON:0001114	48.75	silver quality
transverse colon	UBERON:0001157	47.81	gold quality
tibial artery	UBERON:0007610	47.60	gold quality
myometrium	UBERON:0001296	47.25	gold quality
right adrenal gland	UBERON:0001233	46.64	gold quality
Ammon’s horn	UBERON:0001954	46.62	gold quality
urinary bladder	UBERON:0001255	46.61	gold quality
body of stomach	UBERON:0001161	46.30	gold quality
cerebellar hemisphere	UBERON:0002245	45.98	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	45.77	gold quality
thoracic aorta	UBERON:0001515	45.63	gold quality
right hemisphere of cerebellum	UBERON:0014890	45.57	silver quality
lower esophagus	UBERON:0013473	45.49	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.