LINC01766

Summary

LINC01766 (long intergenic non-protein coding RNA 1766, HGNC:52556) is a long non-coding RNA gene on chromosome 19q13.12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52556
Approved symbol	LINC01766
Name	long intergenic non-protein coding RNA 1766
Location	19q13.12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224910
Ensembl biotype	lncRNA
Entrez	102723617
RNAcentral	URS000075A7A3 — lncRNA, 374 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 25 — 25 lncRNA

ENST00000453968, ENST00000638356, ENST00000655429, ENST00000656011, ENST00000657146, ENST00000657962, ENST00000659371, ENST00000660835, ENST00000661919, ENST00000665580, ENST00000667472, ENST00000669392, ENST00000702449, ENST00000716278, ENST00000716279, ENST00000841208, ENST00000841209, ENST00000841210, ENST00000841211, ENST00000841212, ENST00000841213, ENST00000841214, ENST00000841215, ENST00000841216, ENST00000841217

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000453968 — 3 exons

Exon	Start	End
ENSE00001636268	35597875	35597957
ENSE00001706938	35601305	35601501
ENSE00004029369	35600641	35600754

Expression profiles

Bgee: expression breadth broad, 89 present calls, max score 84.93.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0075 / max 4.7525, expressed in 4 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
175353	0.0075	4

Top tissues by expression

89 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	84.93	gold quality
testis	UBERON:0000473	83.97	gold quality
right testis	UBERON:0004534	83.72	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	75.49	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	74.88	gold quality
muscle tissue	UBERON:0002385	66.19	gold quality
ganglionic eminence	UBERON:0004023	58.56	gold quality
right adrenal gland	UBERON:0001233	57.93	gold quality
liver	UBERON:0002107	57.33	silver quality
adrenal gland	UBERON:0002369	56.41	gold quality
right adrenal gland cortex	UBERON:0035827	56.35	gold quality
left adrenal gland cortex	UBERON:0035825	55.71	gold quality
left adrenal gland	UBERON:0001234	55.68	gold quality
bone marrow	UBERON:0002371	54.66	silver quality
multicellular organism	UBERON:0000468	54.06	gold quality
monocyte	CL:0000576	53.99	gold quality
adult mammalian kidney	UBERON:0000082	53.96	gold quality
blood	UBERON:0000178	52.23	gold quality
kidney	UBERON:0002113	51.41	gold quality
prefrontal cortex	UBERON:0000451	50.45	gold quality
cerebellum	UBERON:0002037	50.16	gold quality
cerebellar cortex	UBERON:0002129	50.03	gold quality
right hemisphere of cerebellum	UBERON:0014890	49.62	gold quality
cerebellar hemisphere	UBERON:0002245	49.61	gold quality
gastrocnemius	UBERON:0001388	49.28	gold quality
islet of Langerhans	UBERON:0000006	48.70	gold quality
body of pancreas	UBERON:0001150	47.90	gold quality
brain	UBERON:0000955	46.57	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	45.99	gold quality
heart left ventricle	UBERON:0002084	45.72	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.