LINC01767

Summary

LINC01767 (long intergenic non-protein coding RNA 1767, HGNC:52557) is a long non-coding RNA gene on chromosome 1p32.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52557
Approved symbol	LINC01767
Name	long intergenic non-protein coding RNA 1767
Location	1p32.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	CRLM1
Ensembl gene	ENSG00000223956
Ensembl biotype	lncRNA
Entrez	105378744
RNAcentral	URS0000BC43F3 — lncRNA, 559 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 9 lncRNA

ENST00000451914, ENST00000635434, ENST00000653637, ENST00000662108, ENST00000663880, ENST00000669154, ENST00000670778, ENST00000690755, ENST00000703068

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000451914 — 4 exons

Exon	Start	End
ENSE00001679266	56415533	56415609
ENSE00001686362	56415248	56415342
ENSE00003987831	56414918	56415150
ENSE00004039861	56415782	56415967

Expression profiles

Bgee: expression breadth ubiquitous, 123 present calls, max score 89.23.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.2224 / max 32.2062, expressed in 78 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
2985	0.0970	41
2986	0.0869	37
2987	0.0385	10

Top tissues by expression

126 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
liver	UBERON:0002107	89.23	gold quality
right lobe of liver	UBERON:0001114	87.05	gold quality
quadriceps femoris	UBERON:0001377	84.15	gold quality
cerebellar vermis	UBERON:0004720	82.57	gold quality
thymus	UBERON:0002370	73.60	silver quality
sural nerve	UBERON:0015488	72.99	gold quality
skeletal muscle tissue	UBERON:0001134	68.39	gold quality
bone marrow cell	CL:0002092	67.91	silver quality
colonic epithelium	UBERON:0000397	66.71	silver quality
muscle tissue	UBERON:0002385	65.85	gold quality
tonsil	UBERON:0002372	63.23	gold quality
body of pancreas	UBERON:0001150	61.58	gold quality
pancreas	UBERON:0001264	60.44	gold quality
calcaneal tendon	UBERON:0003701	59.46	gold quality
bone marrow	UBERON:0002371	59.35	silver quality
hindlimb stylopod muscle	UBERON:0004252	57.97	gold quality
ganglionic eminence	UBERON:0004023	57.66	gold quality
islet of Langerhans	UBERON:0000006	57.32	gold quality
stomach	UBERON:0000945	56.63	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	56.57	gold quality
lower esophagus mucosa	UBERON:0035834	56.49	gold quality
body of stomach	UBERON:0001161	56.45	gold quality
lung	UBERON:0002048	56.21	gold quality
uterine cervix	UBERON:0000002	55.96	gold quality
urinary bladder	UBERON:0001255	55.92	gold quality
ectocervix	UBERON:0012249	55.80	gold quality
blood	UBERON:0000178	55.48	gold quality
right lung	UBERON:0002167	55.47	gold quality
upper lobe of left lung	UBERON:0008952	55.14	gold quality
lymph node	UBERON:0000029	54.61	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.92

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.