LINC01772

Summary

LINC01772 (long intergenic non-protein coding RNA 1772, HGNC:52562) is a long non-coding RNA gene on chromosome 1p36.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52562
Approved symbol	LINC01772
Name	long intergenic non-protein coding RNA 1772
Location	1p36.13
Locus type	RNA, long non-coding
Status	Approved
Aliases	ENSG00000226029
Ensembl gene	ENSG00000226029
Ensembl biotype	lncRNA
Entrez	107984921
RNAcentral	URS000024580C — lncRNA, 3245 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000457898

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000457898 — 2 exons

Exon	Start	End
ENSE00001675093	16467577	16468481
ENSE00001761634	16460948	16463287

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 76.66.

Top tissues by expression

132 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
cerebellum	UBERON:0002037	76.66	gold quality
cerebellar cortex	UBERON:0002129	76.66	gold quality
cerebellar hemisphere	UBERON:0002245	76.58	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.31	gold quality
right hemisphere of cerebellum	UBERON:0014890	76.23	gold quality
sural nerve	UBERON:0015488	71.98	gold quality
stromal cell of endometrium	CL:0002255	70.02	gold quality
cortical plate	UBERON:0005343	69.36	gold quality
monocyte	CL:0000576	68.13	gold quality
ganglionic eminence	UBERON:0004023	67.83	gold quality
leukocyte	CL:0000738	67.76	gold quality
primary visual cortex	UBERON:0002436	67.50	gold quality
bone marrow cell	CL:0002092	66.73	silver quality
right ovary	UBERON:0002118	66.64	gold quality
apex of heart	UBERON:0002098	66.33	gold quality
superior frontal gyrus	UBERON:0002661	66.09	gold quality
ovary	UBERON:0000992	66.02	gold quality
ventricular zone	UBERON:0003053	65.89	gold quality
left ovary	UBERON:0002119	65.83	gold quality
ascending aorta	UBERON:0001496	65.13	gold quality
tibial nerve	UBERON:0001323	65.10	gold quality
thoracic aorta	UBERON:0001515	65.08	gold quality
descending thoracic aorta	UBERON:0002345	64.85	gold quality
colonic epithelium	UBERON:0000397	64.84	silver quality
nucleus accumbens	UBERON:0001882	64.25	gold quality
right frontal lobe	UBERON:0002810	64.03	gold quality
popliteal artery	UBERON:0002250	63.89	gold quality
tibial artery	UBERON:0007610	63.88	gold quality
myometrium	UBERON:0001296	63.82	gold quality
caudate nucleus	UBERON:0001873	63.70	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.85

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.