LINC01777

Summary

LINC01777 (long intergenic non-protein coding RNA 1777, HGNC:52567) is a long non-coding RNA gene on chromosome 1p36.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52567
Approved symbol	LINC01777
Name	long intergenic non-protein coding RNA 1777
Location	1p36.32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000235054
Ensembl biotype	lncRNA
Entrez	284661
RNAcentral	URS000075F0CB — lncRNA, 2074 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 15 — 15 lncRNA

ENST00000423197, ENST00000633821, ENST00000635002, ENST00000635312, ENST00000635642, ENST00000659315, ENST00000663417, ENST00000665284, ENST00000667352, ENST00000668086, ENST00000669931, ENST00000670434, ENST00000671656, ENST00000828650, ENST00000828651

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000423197 — 6 exons

Exon	Start	End
ENSE00001698459	4415553	4415587
ENSE00001730788	4416312	4416548
ENSE00001740653	4423994	4424687
ENSE00001766591	4422760	4423187
ENSE00001768876	4412051	4412632
ENSE00001806637	4423348	4423448

Expression profiles

Bgee: expression breadth broad, 81 present calls, max score 70.35.

Top tissues by expression

181 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ganglionic eminence	UBERON:0004023	70.35	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	69.13	gold quality
bone marrow cell	CL:0002092	64.27	silver quality
parotid gland	UBERON:0001831	63.08	gold quality
left testis	UBERON:0004533	60.61	gold quality
heart right ventricle	UBERON:0002080	60.40	gold quality
right testis	UBERON:0004534	60.12	gold quality
testis	UBERON:0000473	58.84	gold quality
myocardium	UBERON:0002349	56.71	gold quality
tendon of biceps brachii	UBERON:0008188	55.95	gold quality
nasal cavity epithelium	UBERON:0005384	55.94	gold quality
medial globus pallidus	UBERON:0002477	54.49	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	54.48	gold quality
buccal mucosa cell	CL:0002336	54.37	gold quality
monocyte	CL:0000576	53.68	silver quality
tendon	UBERON:0000043	52.87	gold quality
globus pallidus	UBERON:0001875	52.34	gold quality
cartilage tissue	UBERON:0002418	52.11	gold quality
islet of Langerhans	UBERON:0000006	51.93	gold quality
right lobe of liver	UBERON:0001114	50.68	gold quality
Brodmann (1909) area 46	UBERON:0006483	49.27	gold quality
prefrontal cortex	UBERON:0000451	49.04	gold quality
mammalian vulva	UBERON:0000997	48.39	gold quality
bronchial epithelial cell	CL:0002328	48.07	gold quality
saliva-secreting gland	UBERON:0001044	48.06	silver quality
bronchus	UBERON:0002185	47.93	gold quality
apex of heart	UBERON:0002098	47.57	gold quality
lymph node	UBERON:0000029	47.14	gold quality
cardiac ventricle	UBERON:0002082	47.11	gold quality
right lobe of thyroid gland	UBERON:0001119	46.95	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.97

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.