LINC01787

Summary

LINC01787 (long intergenic non-protein coding RNA 1787, HGNC:52576) is a long non-coding RNA gene on chromosome 1p21.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52576
Approved symbol	LINC01787
Name	long intergenic non-protein coding RNA 1787
Location	1p21.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231987
Ensembl biotype	lncRNA
Entrez	101928241
RNAcentral	URS0000034673 — lncRNA, 1994 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000435311

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000435311 — 6 exons

Exon	Start	End
ENSE00001605261	96304273	96304338
ENSE00001692400	96303484	96303564
ENSE00001693372	96355226	96355267
ENSE00001744639	96374082	96374125
ENSE00001791039	96353154	96353232
ENSE00001796768	96254069	96255750

Expression profiles

Bgee: expression breadth broad, 21 present calls, max score 79.98.

Top tissues by expression

21 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	79.98	silver quality
urinary bladder	UBERON:0001255	53.08	silver quality
islet of Langerhans	UBERON:0000006	50.62	silver quality
prefrontal cortex	UBERON:0000451	50.30	silver quality
muscle of leg	UBERON:0001383	49.77	silver quality
blood	UBERON:0000178	47.58	silver quality
stomach	UBERON:0000945	47.40	silver quality
intestine	UBERON:0000160	46.56	silver quality
adult mammalian kidney	UBERON:0000082	46.16	silver quality
gastrocnemius	UBERON:0001388	46.16	silver quality
body of stomach	UBERON:0001161	42.15	silver quality
skin of leg	UBERON:0001511	41.27	silver quality
subcutaneous adipose tissue	UBERON:0002190	40.61	silver quality
adipose tissue	UBERON:0001013	40.40	silver quality
tibial artery	UBERON:0007610	39.30	silver quality
body of uterus	UBERON:0009853	38.00	silver quality
lower esophagus muscularis layer	UBERON:0035833	37.47	silver quality
fundus of stomach	UBERON:0001160	37.12	silver quality
pituitary gland	UBERON:0000007	36.22	silver quality
omental fat pad	UBERON:0010414	36.04	silver quality
lung	UBERON:0002048	35.27	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.