LINC01790

Summary

LINC01790 (long intergenic non-protein coding RNA 1790, HGNC:52579) is a long non-coding RNA gene on chromosome 2q32.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52579
Approved symbol	LINC01790
Name	long intergenic non-protein coding RNA 1790
Location	2q32.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000230173
Ensembl biotype	lncRNA
Entrez	101927431
RNAcentral	URS00005C6FEC — lncRNA, 2852 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000447194

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000447194 — 4 exons

Exon	Start	End
ENSE00001632475	194744524	194744698
ENSE00001669155	194759170	194761435
ENSE00001713492	194730595	194730703
ENSE00001784539	194736025	194736326

Expression profiles

Bgee: expression breadth tissue_specific, 5 present calls, max score 81.50.

Top tissues by expression

5 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.50	silver quality
bone marrow cell	CL:0002092	67.36	silver quality
monocyte	CL:0000576	52.21	silver quality
blood	UBERON:0000178	50.97	silver quality
left adrenal gland cortex	UBERON:0035825	43.09	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.77

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.