LINC01791

Summary

LINC01791 (long intergenic non-protein coding RNA 1791, HGNC:52581) is a long non-coding RNA gene on chromosome 19q12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52581
Approved symbol	LINC01791
Name	long intergenic non-protein coding RNA 1791
Location	19q12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267777
Ensembl biotype	lncRNA
Entrez	107985312
RNAcentral	URS0000BC45D7 — lncRNA, 683 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 26 — 26 lncRNA

ENST00000589511, ENST00000654096, ENST00000655296, ENST00000655851, ENST00000658745, ENST00000658988, ENST00000659241, ENST00000659731, ENST00000660210, ENST00000660315, ENST00000661073, ENST00000666238, ENST00000667120, ENST00000670066, ENST00000670562, ENST00000671470, ENST00000756131, ENST00000756132, ENST00000756133, ENST00000756134, ENST00000756135, ENST00000756136, ENST00000756137, ENST00000756138, ENST00000756139, ENST00000756140

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000589511 — 5 exons

Exon	Start	End
ENSE00002767937	31207499	31207663
ENSE00002799816	31204746	31204920
ENSE00002829212	31195590	31195703
ENSE00002933020	31167685	31167833
ENSE00004105905	31167512	31167589

Expression profiles

Bgee: expression breadth ubiquitous, 106 present calls, max score 82.87.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0114 / max 10.3750, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
175036	0.0114	3

Top tissues by expression

110 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.87	gold quality
sural nerve	UBERON:0015488	77.70	gold quality
left testis	UBERON:0004533	74.80	gold quality
testis	UBERON:0000473	74.31	gold quality
right testis	UBERON:0004534	72.52	gold quality
bone marrow cell	CL:0002092	71.85	gold quality
bone marrow	UBERON:0002371	71.45	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	70.03	gold quality
skeletal muscle tissue	UBERON:0001134	68.91	silver quality
thymus	UBERON:0002370	67.56	silver quality
cortical plate	UBERON:0005343	64.49	gold quality
quadriceps femoris	UBERON:0001377	64.14	gold quality
cerebellar vermis	UBERON:0004720	63.05	gold quality
monocyte	CL:0000576	57.29	gold quality
blood	UBERON:0000178	52.82	gold quality
endometrium	UBERON:0001295	51.50	silver quality
calcaneal tendon	UBERON:0003701	51.43	gold quality
superior frontal gyrus	UBERON:0002661	51.32	gold quality
prefrontal cortex	UBERON:0000451	50.15	gold quality
liver	UBERON:0002107	49.57	silver quality
islet of Langerhans	UBERON:0000006	49.52	gold quality
frontal cortex	UBERON:0001870	47.88	gold quality
muscle of leg	UBERON:0001383	47.80	gold quality
right lobe of liver	UBERON:0001114	47.70	silver quality
gall bladder	UBERON:0002110	47.61	gold quality
multicellular organism	UBERON:0000468	47.60	gold quality
cortex of kidney	UBERON:0001225	47.14	gold quality
cerebellar hemisphere	UBERON:0002245	46.72	silver quality
pancreas	UBERON:0001264	46.69	gold quality
ovary	UBERON:0000992	46.57	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.79

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.