LINC01796

Summary

LINC01796 (long intergenic non-protein coding RNA 1796, HGNC:52586) is a long non-coding RNA gene on chromosome 2q12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52586
Approved symbol	LINC01796
Name	long intergenic non-protein coding RNA 1796
Location	2q12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000277527
Ensembl biotype	lncRNA
Entrez	105373518
RNAcentral	URS000076EA26 — lncRNA, 709 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000611915, ENST00000657317, ENST00000663518, ENST00000666815, ENST00000670084, ENST00000718874

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000611915 — 4 exons

Exon	Start	End
ENSE00003716805	102891263	102891434
ENSE00003724186	102895633	102895745
ENSE00003742879	102894573	102894777
ENSE00003746282	102873183	102873580

Expression profiles

Bgee: expression breadth broad, 98 present calls, max score 73.20.

Top tissues by expression

98 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	73.20	gold quality
colonic epithelium	UBERON:0000397	63.70	silver quality
right testis	UBERON:0004534	62.83	gold quality
left testis	UBERON:0004533	61.89	gold quality
testis	UBERON:0000473	61.54	gold quality
skeletal muscle tissue	UBERON:0001134	60.71	silver quality
ganglionic eminence	UBERON:0004023	59.27	gold quality
bone marrow	UBERON:0002371	58.81	gold quality
cortical plate	UBERON:0005343	58.73	silver quality
liver	UBERON:0002107	53.86	silver quality
calcaneal tendon	UBERON:0003701	53.16	silver quality
blood	UBERON:0000178	52.28	silver quality
monocyte	CL:0000576	52.07	gold quality
adrenal tissue	UBERON:0018303	51.95	silver quality
lymph node	UBERON:0000029	51.00	gold quality
gall bladder	UBERON:0002110	48.55	gold quality
prefrontal cortex	UBERON:0000451	48.19	silver quality
placenta	UBERON:0001987	48.04	silver quality
muscle of leg	UBERON:0001383	47.90	gold quality
duodenum	UBERON:0002114	47.86	silver quality
smooth muscle tissue	UBERON:0001135	47.66	gold quality
cortex of kidney	UBERON:0001225	47.61	silver quality
multicellular organism	UBERON:0000468	47.12	gold quality
kidney	UBERON:0002113	46.94	silver quality
cerebellar hemisphere	UBERON:0002245	46.83	silver quality
gastrocnemius	UBERON:0001388	46.72	silver quality
left adrenal gland cortex	UBERON:0035825	46.23	gold quality
islet of Langerhans	UBERON:0000006	46.13	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	45.90	silver quality
heart left ventricle	UBERON:0002084	45.70	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.97

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.