LINC01797

Summary

LINC01797 (long intergenic non-protein coding RNA 1797, HGNC:52587) is a long non-coding RNA gene on chromosome 2p14.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52587
Approved symbol	LINC01797
Name	long intergenic non-protein coding RNA 1797
Location	2p14
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000237179
Ensembl biotype	lncRNA
Entrez	101927577
RNAcentral	URS000075C9FF — lncRNA, 860 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000432410, ENST00000433432, ENST00000451698, ENST00000660433, ENST00000670163, ENST00000759204, ENST00000759205, ENST00000759206

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000432410 — 2 exons

Exon	Start	End
ENSE00001737633	66697158	66697295
ENSE00001798751	66703118	66703197

Expression profiles

Bgee: expression breadth ubiquitous, 142 present calls, max score 97.88.

Top tissues by expression

235 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	97.88	silver quality
right uterine tube	UBERON:0001302	89.42	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.65	gold quality
colonic epithelium	UBERON:0000397	81.84	gold quality
cerebellar hemisphere	UBERON:0002245	81.34	gold quality
cerebellar cortex	UBERON:0002129	81.22	gold quality
right hemisphere of cerebellum	UBERON:0014890	80.51	gold quality
muscle layer of sigmoid colon	UBERON:0035805	79.11	gold quality
adrenal tissue	UBERON:0018303	78.68	gold quality
cerebellum	UBERON:0002037	78.26	gold quality
right adrenal gland cortex	UBERON:0035827	77.91	gold quality
left uterine tube	UBERON:0001303	77.35	gold quality
right adrenal gland	UBERON:0001233	76.96	gold quality
oviduct epithelium	UBERON:0004804	76.45	gold quality
left adrenal gland cortex	UBERON:0035825	75.96	gold quality
smooth muscle tissue	UBERON:0001135	75.10	gold quality
body of uterus	UBERON:0009853	75.02	gold quality
left adrenal gland	UBERON:0001234	74.89	gold quality
fallopian tube	UBERON:0003889	74.18	gold quality
adrenal cortex	UBERON:0001235	73.86	gold quality
adrenal gland	UBERON:0002369	73.35	gold quality
ectocervix	UBERON:0012249	71.59	gold quality
lower esophagus muscularis layer	UBERON:0035833	71.10	gold quality
lower esophagus	UBERON:0013473	71.07	gold quality
endocervix	UBERON:0000458	69.72	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	69.30	gold quality
right ovary	UBERON:0002118	69.27	gold quality
left ovary	UBERON:0002119	67.16	gold quality
uterine cervix	UBERON:0000002	66.56	gold quality
colon	UBERON:0001155	66.15	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.