LINC01802

Summary

LINC01802 (long intergenic non-protein coding RNA 1802, HGNC:52591) is a long non-coding RNA gene on chromosome 2q33.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52591
Approved symbol	LINC01802
Name	long intergenic non-protein coding RNA 1802
Location	2q33.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000225064
Ensembl biotype	lncRNA
Entrez	105373852
RNAcentral	URS0000BC44E4 — lncRNA, 910 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000438824, ENST00000759008, ENST00000759009

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000438824 — 4 exons

Exon	Start	End
ENSE00001609347	207268701	207268893
ENSE00004111412	207270484	207270802
ENSE00004111413	207260440	207260567
ENSE00004111415	207251438	207251866

Expression profiles

Bgee: expression breadth broad, 78 present calls, max score 82.39.

Top tissues by expression

83 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.39	gold quality
hindlimb stylopod muscle	UBERON:0004252	80.66	gold quality
quadriceps femoris	UBERON:0001377	75.04	gold quality
bone marrow cell	CL:0002092	68.45	silver quality
skeletal muscle tissue	UBERON:0001134	64.65	silver quality
cerebellar vermis	UBERON:0004720	64.61	gold quality
liver	UBERON:0002107	62.77	gold quality
adult mammalian kidney	UBERON:0000082	62.45	gold quality
kidney	UBERON:0002113	62.23	gold quality
thymus	UBERON:0002370	61.50	silver quality
lung	UBERON:0002048	60.41	silver quality
cortex of kidney	UBERON:0001225	60.30	gold quality
superior frontal gyrus	UBERON:0002661	59.95	gold quality
placenta	UBERON:0001987	56.29	gold quality
monocyte	CL:0000576	55.51	gold quality
blood	UBERON:0000178	53.73	gold quality
prefrontal cortex	UBERON:0000451	53.50	gold quality
primary visual cortex	UBERON:0002436	52.46	gold quality
metanephros cortex	UBERON:0010533	52.30	gold quality
gall bladder	UBERON:0002110	52.09	gold quality
cerebellar cortex	UBERON:0002129	52.06	silver quality
urinary bladder	UBERON:0001255	51.20	gold quality
calcaneal tendon	UBERON:0003701	50.54	silver quality
left lobe of thyroid gland	UBERON:0001120	50.49	gold quality
islet of Langerhans	UBERON:0000006	50.16	gold quality
cerebellar hemisphere	UBERON:0002245	49.71	silver quality
myometrium	UBERON:0001296	49.42	gold quality
gastrocnemius	UBERON:0001388	48.98	gold quality
smooth muscle tissue	UBERON:0001135	47.90	gold quality
corpus callosum	UBERON:0002336	47.65	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.81

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.