LINC01808

Summary

LINC01808 (long intergenic non-protein coding RNA 1808, HGNC:52611) is a long non-coding RNA gene on chromosome 2p24.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52611
Approved symbol	LINC01808
Name	long intergenic non-protein coding RNA 1808
Location	2p24.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000237992
Ensembl biotype	lncRNA
Entrez	105373460
RNAcentral	URS00026A1B54 — lncRNA, 2299 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 11 — 11 lncRNA

ENST00000450628, ENST00000641680, ENST00000641932, ENST00000654520, ENST00000657829, ENST00000659488, ENST00000663794, ENST00000666694, ENST00000669699, ENST00000670653, ENST00000822351

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000450628 — 4 exons

Exon	Start	End
ENSE00001637524	19475451	19475612
ENSE00001680859	19480318	19480425
ENSE00001744673	19488368	19488850
ENSE00003811922	19468997	19469080

Expression profiles

Bgee: expression breadth broad, 80 present calls, max score 88.35.

Top tissues by expression

183 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.35	gold quality
buccal mucosa cell	CL:0002336	74.55	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	69.74	gold quality
bone marrow cell	CL:0002092	64.74	silver quality
hindlimb stylopod muscle	UBERON:0004252	60.26	gold quality
right testis	UBERON:0004534	58.98	gold quality
left testis	UBERON:0004533	58.29	gold quality
testis	UBERON:0000473	56.99	gold quality
vermiform appendix	UBERON:0001154	54.33	gold quality
descending thoracic aorta	UBERON:0002345	52.09	gold quality
sural nerve	UBERON:0015488	51.86	silver quality
monocyte	CL:0000576	50.14	silver quality
caecum	UBERON:0001153	50.05	gold quality
adrenal tissue	UBERON:0018303	49.56	gold quality
rectum	UBERON:0001052	49.26	gold quality
mucosa of stomach	UBERON:0001199	48.92	gold quality
ascending aorta	UBERON:0001496	48.91	gold quality
thoracic aorta	UBERON:0001515	48.91	gold quality
body of uterus	UBERON:0009853	48.84	gold quality
muscle of leg	UBERON:0001383	48.80	gold quality
islet of Langerhans	UBERON:0000006	48.52	gold quality
gastrocnemius	UBERON:0001388	48.51	gold quality
aorta	UBERON:0000947	47.86	gold quality
popliteal artery	UBERON:0002250	46.87	gold quality
tibial artery	UBERON:0007610	46.82	gold quality
tonsil	UBERON:0002372	46.50	gold quality
smooth muscle tissue	UBERON:0001135	45.78	silver quality
prefrontal cortex	UBERON:0000451	45.48	silver quality
tibial nerve	UBERON:0001323	45.47	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	44.68	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.59

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.