LINC01812

Summary

LINC01812 (long intergenic non-protein coding RNA 1812, HGNC:52616) is a long non-coding RNA gene on chromosome 2p14.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52616
Approved symbol	LINC01812
Name	long intergenic non-protein coding RNA 1812
Location	2p14
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000237013
Ensembl biotype	lncRNA
Entrez	101927701
RNAcentral	URS000075D03B — lncRNA, 740 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000457448, ENST00000786817

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000457448 — 3 exons

Exon	Start	End
ENSE00001675075	67823874	67823979
ENSE00004163761	67825489	67825658
ENSE00004163762	67796047	67796598

Expression profiles

Bgee: expression breadth broad, 59 present calls, max score 84.74.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1380 / max 11.5197, expressed in 78 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
28833	0.1008	50
28834	0.0372	11

Top tissues by expression

176 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.74	silver quality
secondary oocyte	CL:0000655	60.78	gold quality
islet of Langerhans	UBERON:0000006	59.10	gold quality
metanephros cortex	UBERON:0010533	58.96	gold quality
pancreas	UBERON:0001264	55.64	gold quality
stromal cell of endometrium	CL:0002255	54.74	gold quality
body of pancreas	UBERON:0001150	54.60	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	53.13	gold quality
vermiform appendix	UBERON:0001154	49.71	gold quality
Brodmann (1909) area 9	UBERON:0013540	48.87	gold quality
metanephros	UBERON:0000081	48.40	gold quality
cortex of kidney	UBERON:0001225	47.94	gold quality
anterior cingulate cortex	UBERON:0009835	47.35	silver quality
monocyte	CL:0000576	47.26	silver quality
body of stomach	UBERON:0001161	46.09	gold quality
gastrocnemius	UBERON:0001388	46.03	silver quality
right hemisphere of cerebellum	UBERON:0014890	45.98	gold quality
tibial nerve	UBERON:0001323	45.48	silver quality
cerebellar hemisphere	UBERON:0002245	45.14	silver quality
cerebellar cortex	UBERON:0002129	45.11	silver quality
right coronary artery	UBERON:0001625	44.68	gold quality
tendon	UBERON:0000043	44.65	gold quality
cerebellum	UBERON:0002037	43.89	silver quality
oocyte	CL:0000023	43.84	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
caecum	UBERON:0001153	43.23	silver quality
stomach	UBERON:0000945	43.11	gold quality
skin of leg	UBERON:0001511	43.07	silver quality
tibial artery	UBERON:0007610	43.07	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	43.05	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.