LINC01815

Summary

LINC01815 (long intergenic non-protein coding RNA 1815, HGNC:52619) is a long non-coding RNA gene on chromosome 2p12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52619
Approved symbol	LINC01815
Name	long intergenic non-protein coding RNA 1815
Location	2p12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000235519
Ensembl biotype	lncRNA
Entrez	100507201
RNAcentral	URS000075D472 — lncRNA, 843 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 11 — 11 lncRNA

ENST00000446580, ENST00000641468, ENST00000654231, ENST00000656933, ENST00000657869, ENST00000657999, ENST00000729819, ENST00000729820, ENST00000729821, ENST00000729822, ENST00000729823

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000446580 — 4 exons

Exon	Start	End
ENSE00003813838	81461697	81461752
ENSE00003879195	81462454	81462796
ENSE00004057763	81461359	81461440
ENSE00004057774	81466574	81466988

Expression profiles

Bgee: expression breadth broad, 28 present calls, max score 92.40.

Top tissues by expression

174 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.40	gold quality
left testis	UBERON:0004533	70.14	gold quality
right testis	UBERON:0004534	69.43	gold quality
testis	UBERON:0000473	67.97	gold quality
tibialis anterior	UBERON:0001385	59.73	silver quality
islet of Langerhans	UBERON:0000006	54.79	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
epithelial cell of pancreas	CL:0000083	53.88	gold quality
pancreatic ductal cell	CL:0002079	53.63	silver quality
upper arm skin	UBERON:0004263	53.52	gold quality
ileal mucosa	UBERON:0000331	53.23	silver quality
deltoid	UBERON:0001476	52.53	silver quality
monocyte	CL:0000576	52.49	silver quality
cardiac atrium	UBERON:0002081	51.83	gold quality
myocardium	UBERON:0002349	50.25	gold quality
gastrocnemius	UBERON:0001388	48.67	gold quality
tibial nerve	UBERON:0001323	48.29	gold quality
pancreas	UBERON:0001264	47.59	gold quality
nasal cavity epithelium	UBERON:0005384	47.03	gold quality
quadriceps femoris	UBERON:0001377	46.92	gold quality
metanephros	UBERON:0000081	46.07	gold quality
vastus lateralis	UBERON:0001379	45.40	gold quality
adult mammalian kidney	UBERON:0000082	44.98	gold quality
middle temporal gyrus	UBERON:0002771	44.61	gold quality
anatomical system	UBERON:0000467	44.37	gold quality
multicellular organism	UBERON:0000468	44.03	gold quality
material anatomical entity	UBERON:0000465	44.02	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	44.01	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.30

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.