LINC01822

Summary

LINC01822 (long intergenic non-protein coding RNA 1822, HGNC:52627) is a long non-coding RNA gene on chromosome 2p24.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52627
Approved symbol	LINC01822
Name	long intergenic non-protein coding RNA 1822
Location	2p24.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229621
Ensembl biotype	lncRNA
Entrez	645949
RNAcentral	URS0000759AED — lncRNA, 2127 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 18 — 18 lncRNA

ENST00000412424, ENST00000416032, ENST00000435682, ENST00000653083, ENST00000654277, ENST00000663972, ENST00000664721, ENST00000667311, ENST00000668104, ENST00000671687, ENST00000753595, ENST00000753596, ENST00000753826, ENST00000753827, ENST00000753828, ENST00000753829, ENST00000753830, ENST00000753831

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000412424 — 3 exons

Exon	Start	End
ENSE00004100887	21647538	21647752
ENSE00004101286	21638184	21638538
ENSE00004101287	21649339	21649563

Expression profiles

Bgee: expression breadth broad, 24 present calls, max score 89.73.

Top tissues by expression

24 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	89.73	gold quality
hindlimb stylopod muscle	UBERON:0004252	56.99	silver quality
liver	UBERON:0002107	51.87	silver quality
calcaneal tendon	UBERON:0003701	50.49	silver quality
right lobe of liver	UBERON:0001114	49.26	silver quality
prefrontal cortex	UBERON:0000451	48.79	silver quality
islet of Langerhans	UBERON:0000006	48.30	silver quality
heart left ventricle	UBERON:0002084	47.47	gold quality
heart	UBERON:0000948	47.21	gold quality
gastrocnemius	UBERON:0001388	46.51	silver quality
adrenal gland	UBERON:0002369	46.33	silver quality
right atrium auricular region	UBERON:0006631	45.03	gold quality
blood	UBERON:0000178	43.83	silver quality
left coronary artery	UBERON:0001626	43.83	silver quality
skin of abdomen	UBERON:0001416	43.29	silver quality
corpus callosum	UBERON:0002336	42.99	silver quality
ascending aorta	UBERON:0001496	42.04	silver quality
tibial artery	UBERON:0007610	41.26	silver quality
skin of leg	UBERON:0001511	41.02	silver quality
adipose tissue	UBERON:0001013	39.57	silver quality
omental fat pad	UBERON:0010414	38.45	silver quality
testis	UBERON:0000473	30.06	gold quality
right testis	UBERON:0004534	29.06	silver quality
left testis	UBERON:0004533	27.63	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.