LINC01823

Summary

LINC01823 (long intergenic non-protein coding RNA 1823, HGNC:52628) is a long non-coding RNA gene on chromosome 2q14.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52628
Approved symbol	LINC01823
Name	long intergenic non-protein coding RNA 1823
Location	2q14.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224655
Ensembl biotype	lncRNA
Entrez	101927801
RNAcentral	URS00026A26B9 — lncRNA, 1183 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 18 — 18 lncRNA

ENST00000422238, ENST00000422649, ENST00000435895, ENST00000438722, ENST00000651479, ENST00000654341, ENST00000654583, ENST00000654814, ENST00000656779, ENST00000657005, ENST00000657823, ENST00000659754, ENST00000661690, ENST00000663836, ENST00000664416, ENST00000664529, ENST00000668260, ENST00000803225

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000422238 — 3 exons

Exon	Start	End
ENSE00001714828	121794498	121795040
ENSE00001781224	121793189	121793235
ENSE00003842819	121790447	121790519

Expression profiles

Bgee: expression breadth broad, 93 present calls, max score 79.03.

Top tissues by expression

93 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.03	gold quality
sural nerve	UBERON:0015488	70.47	gold quality
ganglionic eminence	UBERON:0004023	58.10	silver quality
skeletal muscle tissue	UBERON:0001134	58.04	gold quality
cortex of kidney	UBERON:0001225	57.70	gold quality
liver	UBERON:0002107	57.37	silver quality
testis	UBERON:0000473	57.02	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	56.36	gold quality
left testis	UBERON:0004533	56.35	gold quality
hindlimb stylopod muscle	UBERON:0004252	55.77	gold quality
monocyte	CL:0000576	55.47	gold quality
leukocyte	CL:0000738	55.12	gold quality
islet of Langerhans	UBERON:0000006	54.73	gold quality
lymph node	UBERON:0000029	54.49	gold quality
muscle of leg	UBERON:0001383	53.68	gold quality
right testis	UBERON:0004534	53.47	gold quality
gastrocnemius	UBERON:0001388	53.02	gold quality
blood	UBERON:0000178	52.06	gold quality
prefrontal cortex	UBERON:0000451	51.74	gold quality
bone marrow	UBERON:0002371	50.39	silver quality
primary visual cortex	UBERON:0002436	49.21	gold quality
frontal cortex	UBERON:0001870	47.65	gold quality
left coronary artery	UBERON:0001626	47.43	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	47.36	gold quality
multicellular organism	UBERON:0000468	47.03	gold quality
cerebellum	UBERON:0002037	46.24	silver quality
placenta	UBERON:0001987	46.21	gold quality
granulocyte	CL:0000094	45.89	silver quality
cerebellar cortex	UBERON:0002129	45.75	silver quality
tibial artery	UBERON:0007610	45.66	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.41

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.