LINC01825

Summary

LINC01825 (long intergenic non-protein coding RNA 1825, HGNC:52631) is a long non-coding RNA gene on chromosome 2q32.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52631
Approved symbol	LINC01825
Name	long intergenic non-protein coding RNA 1825
Location	2q32.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000223466
Ensembl biotype	lncRNA
Entrez	124908063
RNAcentral	URS00026A24D6 — lncRNA, 2251 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000452381, ENST00000665031, ENST00000667270, ENST00000671559, ENST00000760556, ENST00000760557

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000452381 — 2 exons

Exon	Start	End
ENSE00001605299	195533035	195533243
ENSE00001776714	195538041	195538681

Expression profiles

Bgee: expression breadth broad, 88 present calls, max score 78.15.

Top tissues by expression

88 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.15	gold quality
cortex of kidney	UBERON:0001225	62.79	gold quality
lymph node	UBERON:0000029	60.79	gold quality
blood	UBERON:0000178	59.08	gold quality
urinary bladder	UBERON:0001255	58.74	gold quality
leukocyte	CL:0000738	56.13	gold quality
ganglionic eminence	UBERON:0004023	56.01	silver quality
sural nerve	UBERON:0015488	55.50	silver quality
duodenum	UBERON:0002114	55.43	gold quality
monocyte	CL:0000576	55.26	gold quality
vermiform appendix	UBERON:0001154	54.25	gold quality
stromal cell of endometrium	CL:0002255	54.24	silver quality
granulocyte	CL:0000094	53.48	gold quality
right adrenal gland cortex	UBERON:0035827	52.70	gold quality
endometrium	UBERON:0001295	52.24	gold quality
left adrenal gland cortex	UBERON:0035825	52.00	gold quality
bone marrow	UBERON:0002371	51.15	silver quality
left adrenal gland	UBERON:0001234	50.51	gold quality
adrenal gland	UBERON:0002369	50.05	gold quality
smooth muscle tissue	UBERON:0001135	49.90	gold quality
tonsil	UBERON:0002372	49.75	gold quality
prefrontal cortex	UBERON:0000451	49.56	gold quality
right adrenal gland	UBERON:0001233	49.13	gold quality
calcaneal tendon	UBERON:0003701	48.48	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	47.81	gold quality
multicellular organism	UBERON:0000468	47.69	gold quality
gall bladder	UBERON:0002110	47.66	gold quality
frontal cortex	UBERON:0001870	46.90	gold quality
tibial nerve	UBERON:0001323	46.53	silver quality
right ovary	UBERON:0002118	46.44	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.46

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.