LINC01831

Summary

LINC01831 (long intergenic non-protein coding RNA 1831, HGNC:52637) is a long non-coding RNA gene on chromosome 2q12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52637
Approved symbol	LINC01831
Name	long intergenic non-protein coding RNA 1831
Location	2q12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000225765
Ensembl biotype	lncRNA
Entrez	101927331
RNAcentral	URS0000A765EC — lncRNA, 620 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000449772, ENST00000658461, ENST00000661379, ENST00000716810, ENST00000716811, ENST00000716812, ENST00000716813

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000449772 — 2 exons

Exon	Start	End
ENSE00001606265	104413959	104414008
ENSE00001679629	104412227	104412669

Expression profiles

Bgee: expression breadth broad, 73 present calls, max score 88.51.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1148 / max 110.5732, expressed in 9 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
29999	0.1148	9

Top tissues by expression

178 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right lobe of liver	UBERON:0001114	88.51	gold quality
liver	UBERON:0002107	81.41	gold quality
bone marrow cell	CL:0002092	77.67	gold quality
ventricular zone	UBERON:0003053	65.29	gold quality
ganglionic eminence	UBERON:0004023	64.87	gold quality
buccal mucosa cell	CL:0002336	58.65	gold quality
prefrontal cortex	UBERON:0000451	56.70	gold quality
endothelial cell	CL:0000115	56.44	gold quality
monocyte	CL:0000576	54.73	gold quality
metanephros cortex	UBERON:0010533	53.36	gold quality
adult mammalian kidney	UBERON:0000082	53.28	gold quality
right hemisphere of cerebellum	UBERON:0014890	53.23	gold quality
cardia of stomach	UBERON:0001162	52.79	gold quality
Brodmann (1909) area 9	UBERON:0013540	50.76	gold quality
body of pancreas	UBERON:0001150	50.31	gold quality
calcaneal tendon	UBERON:0003701	49.08	silver quality
right atrium auricular region	UBERON:0006631	48.94	gold quality
frontal cortex	UBERON:0001870	48.37	gold quality
metanephros	UBERON:0000081	48.23	gold quality
neocortex	UBERON:0001950	48.11	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	47.92	silver quality
anterior cingulate cortex	UBERON:0009835	47.85	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	47.84	gold quality
kidney	UBERON:0002113	47.41	gold quality
right frontal lobe	UBERON:0002810	47.35	gold quality
cortex of kidney	UBERON:0001225	47.02	gold quality
cerebellar hemisphere	UBERON:0002245	46.81	gold quality
cardiac atrium	UBERON:0002081	46.47	gold quality
cerebral cortex	UBERON:0000956	46.20	gold quality
putamen	UBERON:0001874	46.14	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.