LINC01836

Summary

LINC01836 (long intergenic non-protein coding RNA 1836, HGNC:52652) is a long non-coding RNA gene on chromosome 19p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52652
Approved symbol	LINC01836
Name	long intergenic non-protein coding RNA 1836
Location	19p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267530
Ensembl biotype	lncRNA
Entrez	107985343
RNAcentral	URS0002A5CB88 — lncRNA, 1368 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 13 — 13 lncRNA

ENST00000586061, ENST00000606242, ENST00000654818, ENST00000662249, ENST00000665908, ENST00000686865, ENST00000719201, ENST00000719202, ENST00000719203, ENST00000719204, ENST00000719205, ENST00000719206, ENST00000719207

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000586061 — 2 exons

Exon	Start	End
ENSE00002743307	784787	785080
ENSE00002778976	782796	783330

Expression profiles

Bgee: expression breadth ubiquitous, 128 present calls, max score 77.19.

FANTOM5 (CAGE): breadth broad, TPM avg 1.1719 / max 39.0389, expressed in 483 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
172748	1.1719	483

Top tissues by expression

128 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
metanephros cortex	UBERON:0010533	77.19	gold quality
sural nerve	UBERON:0015488	76.53	gold quality
right lung	UBERON:0002167	75.71	gold quality
body of pancreas	UBERON:0001150	75.62	gold quality
right uterine tube	UBERON:0001302	74.09	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	73.38	gold quality
cortex of kidney	UBERON:0001225	70.67	gold quality
upper lobe of left lung	UBERON:0008952	70.64	gold quality
kidney	UBERON:0002113	70.60	gold quality
pancreas	UBERON:0001264	70.23	gold quality
adult mammalian kidney	UBERON:0000082	70.06	gold quality
lung	UBERON:0002048	70.04	gold quality
tibial nerve	UBERON:0001323	68.59	gold quality
fallopian tube	UBERON:0003889	66.49	gold quality
placenta	UBERON:0001987	66.31	gold quality
minor salivary gland	UBERON:0001830	65.68	gold quality
saliva-secreting gland	UBERON:0001044	65.63	gold quality
right lobe of thyroid gland	UBERON:0001119	65.21	gold quality
left lobe of thyroid gland	UBERON:0001120	64.53	gold quality
thyroid gland	UBERON:0002046	64.53	gold quality
stromal cell of endometrium	CL:0002255	64.10	gold quality
apex of heart	UBERON:0002098	62.78	gold quality
skeletal muscle tissue	UBERON:0001134	62.14	gold quality
thoracic mammary gland	UBERON:0005200	61.85	gold quality
blood	UBERON:0000178	61.75	gold quality
gall bladder	UBERON:0002110	61.60	gold quality
right coronary artery	UBERON:0001625	61.24	gold quality
skin of leg	UBERON:0001511	60.97	gold quality
muscle tissue	UBERON:0002385	60.97	gold quality
right adrenal gland cortex	UBERON:0035827	60.84	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.11

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.