LINC01841

Summary

LINC01841 (long intergenic non-protein coding RNA 1841, HGNC:52655) is a long non-coding RNA gene on chromosome 19p13.12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52655
Approved symbol	LINC01841
Name	long intergenic non-protein coding RNA 1841
Location	19p13.12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000266913
Ensembl biotype	lncRNA
Entrez	105372288
RNAcentral	URS0000392978 — lncRNA, 573 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000586698, ENST00000588438, ENST00000747197, ENST00000747198, ENST00000747199

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000586698 — 4 exons

Exon	Start	End
ENSE00002778449	14325308	14325431
ENSE00002798276	14320240	14320351
ENSE00004088934	14304946	14305675
ENSE00004088935	14363872	14363990

Expression profiles

Bgee: expression breadth ubiquitous, 119 present calls, max score 87.96.

Top tissues by expression

119 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.96	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	76.74	silver quality
granulocyte	CL:0000094	71.01	gold quality
monocyte	CL:0000576	69.09	gold quality
leukocyte	CL:0000738	68.89	gold quality
blood	UBERON:0000178	67.66	gold quality
lymph node	UBERON:0000029	64.78	gold quality
bone marrow	UBERON:0002371	63.11	gold quality
ganglionic eminence	UBERON:0004023	63.06	gold quality
cortical plate	UBERON:0005343	61.84	gold quality
tonsil	UBERON:0002372	61.42	gold quality
vermiform appendix	UBERON:0001154	60.72	gold quality
sural nerve	UBERON:0015488	57.73	silver quality
hindlimb stylopod muscle	UBERON:0004252	56.85	gold quality
spleen	UBERON:0002106	56.77	gold quality
urinary bladder	UBERON:0001255	56.06	gold quality
calcaneal tendon	UBERON:0003701	55.97	gold quality
placenta	UBERON:0001987	55.83	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	55.53	gold quality
duodenum	UBERON:0002114	55.15	gold quality
islet of Langerhans	UBERON:0000006	53.47	gold quality
superior frontal gyrus	UBERON:0002661	52.46	gold quality
prefrontal cortex	UBERON:0000451	52.41	gold quality
right coronary artery	UBERON:0001625	52.34	gold quality
myometrium	UBERON:0001296	52.24	gold quality
tibial artery	UBERON:0007610	51.41	gold quality
popliteal artery	UBERON:0002250	51.40	gold quality
gall bladder	UBERON:0002110	51.39	gold quality
smooth muscle tissue	UBERON:0001135	51.05	gold quality
body of uterus	UBERON:0009853	50.65	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.99

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.