LINC01845

Summary

LINC01845 (long intergenic non-protein coding RNA 1845, HGNC:27747) is a long non-coding RNA gene on chromosome 5q33.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27747
Approved symbol	LINC01845
Name	long intergenic non-protein coding RNA 1845
Location	5q33.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000253298
Ensembl biotype	lncRNA
Entrez	285627
RNAcentral	URS000027FE4F — lncRNA, 2012 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000518418, ENST00000658947

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000518418 — 7 exons

Exon	Start	End
ENSE00002094763	159464218	159464337
ENSE00002102486	159448556	159449456
ENSE00002115043	159459541	159459649
ENSE00002120772	159452582	159452793
ENSE00002125124	159466127	159466276
ENSE00002125967	159453389	159453531
ENSE00002137915	159458425	159458801

Expression profiles

Bgee: expression breadth broad, 47 present calls, max score 94.24.

Top tissues by expression

47 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	94.24	gold quality
colonic epithelium	UBERON:0000397	75.94	gold quality
pancreas	UBERON:0001264	65.47	gold quality
stomach	UBERON:0000945	65.25	gold quality
thyroid gland	UBERON:0002046	64.92	gold quality
sural nerve	UBERON:0015488	60.39	silver quality
thoracic mammary gland	UBERON:0005200	59.31	silver quality
corpus callosum	UBERON:0002336	57.16	gold quality
myometrium	UBERON:0001296	53.70	gold quality
muscle of leg	UBERON:0001383	52.40	silver quality
Brodmann (1909) area 9	UBERON:0013540	52.06	gold quality
monocyte	CL:0000576	50.76	silver quality
blood	UBERON:0000178	50.55	silver quality
lung	UBERON:0002048	48.67	silver quality
cortex of kidney	UBERON:0001225	48.54	silver quality
prefrontal cortex	UBERON:0000451	48.25	gold quality
lymph node	UBERON:0000029	47.90	silver quality
cerebellar cortex	UBERON:0002129	47.85	silver quality
islet of Langerhans	UBERON:0000006	47.64	silver quality
brain	UBERON:0000955	46.31	gold quality
esophagus	UBERON:0001043	45.43	silver quality
colon	UBERON:0001155	45.20	silver quality
intestine	UBERON:0000160	44.97	silver quality
small intestine	UBERON:0002108	44.50	silver quality
kidney	UBERON:0002113	43.94	silver quality
cerebral cortex	UBERON:0000956	43.25	silver quality
tonsil	UBERON:0002372	43.10	silver quality
heart left ventricle	UBERON:0002084	41.64	silver quality
heart	UBERON:0000948	41.46	silver quality
adrenal tissue	UBERON:0018303	40.26	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.95

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.