LINC01847

Summary

LINC01847 (long intergenic non-protein coding RNA 1847, HGNC:52662) is a long non-coding RNA gene on chromosome 5q33.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52662
Approved symbol	LINC01847
Name	long intergenic non-protein coding RNA 1847
Location	5q33.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000253311
Ensembl biotype	lncRNA
Entrez	101927766
RNAcentral	URS00001BF716 — lncRNA, 5607 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000522627, ENST00000523311, ENST00000641163, ENST00000653075, ENST00000811848, ENST00000811849, ENST00000816795, ENST00000816796

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000522627 — 3 exons

Exon	Start	End
ENSE00002101595	159866872	159867035
ENSE00002126556	159867858	159871384
ENSE00002140112	159776772	159778687

Expression profiles

Bgee: expression breadth broad, 54 present calls, max score 70.58.

Top tissues by expression

162 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	70.58	silver quality
left testis	UBERON:0004533	51.79	gold quality
upper leg skin	UBERON:0004262	51.55	silver quality
testis	UBERON:0000473	50.78	gold quality
liver	UBERON:0002107	50.51	gold quality
right testis	UBERON:0004534	50.42	gold quality
monocyte	CL:0000576	50.10	silver quality
right lobe of liver	UBERON:0001114	49.52	gold quality
left uterine tube	UBERON:0001303	48.29	gold quality
prefrontal cortex	UBERON:0000451	47.58	silver quality
islet of Langerhans	UBERON:0000006	46.70	silver quality
muscle of leg	UBERON:0001383	46.32	silver quality
bone marrow	UBERON:0002371	45.69	gold quality
gastrocnemius	UBERON:0001388	45.41	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	44.49	silver quality
lymph node	UBERON:0000029	44.33	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
left ovary	UBERON:0002119	43.07	silver quality
amniotic fluid	UBERON:0000173	43.06	gold quality
anatomical system	UBERON:0000467	42.93	silver quality
multicellular organism	UBERON:0000468	42.82	silver quality
material anatomical entity	UBERON:0000465	42.80	silver quality
skin of hip	UBERON:0001554	42.61	silver quality
secondary oocyte	CL:0000655	42.57	gold quality
renal medulla	UBERON:0000362	42.55	gold quality
minor salivary gland	UBERON:0001830	42.52	gold quality
cortex of kidney	UBERON:0001225	42.38	gold quality
tibial artery	UBERON:0007610	42.29	silver quality
thoracic aorta	UBERON:0001515	42.26	silver quality
aorta	UBERON:0000947	42.23	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	5.38

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.