LINC01850

Summary

LINC01850 (long intergenic non-protein coding RNA 1850, HGNC:52666) is a long non-coding RNA gene on chromosome 2q23.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52666
Approved symbol	LINC01850
Name	long intergenic non-protein coding RNA 1850
Location	2q23.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000227708
Ensembl biotype	lncRNA
Entrez	107985951
RNAcentral	URS0002A358F5 — lncRNA, 2834 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000429916, ENST00000715953, ENST00000743957

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000429916 — 4 exons

Exon	Start	End
ENSE00001615412	153337705	153337780
ENSE00001761268	153354225	153354281
ENSE00001766027	153356536	153356592
ENSE00001803289	153357256	153357422

Expression profiles

Bgee: expression breadth broad, 67 present calls, max score 89.07.

Top tissues by expression

67 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	89.07	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	87.95	gold quality
monocyte	CL:0000576	65.74	gold quality
prefrontal cortex	UBERON:0000451	60.80	gold quality
myometrium	UBERON:0001296	60.55	gold quality
smooth muscle tissue	UBERON:0001135	60.30	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	58.53	gold quality
endometrium	UBERON:0001295	58.39	gold quality
placenta	UBERON:0001987	56.94	gold quality
left adrenal gland cortex	UBERON:0035825	53.79	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	53.47	gold quality
small intestine Peyer’s patch	UBERON:0003454	53.36	gold quality
kidney	UBERON:0002113	52.88	gold quality
body of uterus	UBERON:0009853	52.49	gold quality
body of stomach	UBERON:0001161	51.40	gold quality
left adrenal gland	UBERON:0001234	51.36	gold quality
tibial artery	UBERON:0007610	51.34	gold quality
stomach	UBERON:0000945	51.19	gold quality
gastrocnemius	UBERON:0001388	50.86	gold quality
Brodmann (1909) area 9	UBERON:0013540	50.32	gold quality
ovary	UBERON:0000992	50.29	gold quality
left ovary	UBERON:0002119	50.27	gold quality
substantia nigra	UBERON:0002038	50.26	gold quality
urinary bladder	UBERON:0001255	50.21	gold quality
blood	UBERON:0000178	49.98	gold quality
adult mammalian kidney	UBERON:0000082	49.51	gold quality
ascending aorta	UBERON:0001496	49.10	gold quality
esophagus mucosa	UBERON:0002469	48.80	gold quality
right adrenal gland	UBERON:0001233	48.72	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	48.48	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.63

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.