LINC01851

Summary

LINC01851 (long intergenic non-protein coding RNA 1851, HGNC:52667) is a long non-coding RNA gene on chromosome 2p12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52667
Approved symbol	LINC01851
Name	long intergenic non-protein coding RNA 1851
Location	2p12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000233605
Ensembl biotype	lncRNA
Entrez	101927926
RNAcentral	URS0000329D8D — lncRNA, 635 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000443419, ENST00000661594, ENST00000663337

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000443419 — 3 exons

Exon	Start	End
ENSE00001777258	77915907	77916093
ENSE00003863944	77917703	77918009
ENSE00003884391	77917249	77917404

Expression profiles

Bgee: expression breadth broad, 48 present calls, max score 73.67.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0121 / max 12.5626, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
21118	0.0121	3

Top tissues by expression

48 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	73.67	gold quality
testis	UBERON:0000473	73.34	gold quality
right testis	UBERON:0004534	72.83	gold quality
corpus callosum	UBERON:0002336	58.55	gold quality
multicellular organism	UBERON:0000468	57.50	gold quality
gastrocnemius	UBERON:0001388	56.34	gold quality
monocyte	CL:0000576	54.81	gold quality
cortex of kidney	UBERON:0001225	53.21	gold quality
blood	UBERON:0000178	51.43	gold quality
prefrontal cortex	UBERON:0000451	49.82	gold quality
tibial nerve	UBERON:0001323	48.98	gold quality
superior frontal gyrus	UBERON:0002661	47.02	silver quality
body of pancreas	UBERON:0001150	46.58	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	46.27	gold quality
primary visual cortex	UBERON:0002436	46.09	silver quality
Brodmann (1909) area 9	UBERON:0013540	45.62	gold quality
right atrium auricular region	UBERON:0006631	43.84	gold quality
minor salivary gland	UBERON:0001830	43.57	gold quality
heart left ventricle	UBERON:0002084	43.52	silver quality
Ammon’s horn	UBERON:0001954	43.44	gold quality
tibial artery	UBERON:0007610	43.25	silver quality
substantia nigra	UBERON:0002038	43.04	gold quality
putamen	UBERON:0001874	43.01	gold quality
skin of leg	UBERON:0001511	42.89	gold quality
body of stomach	UBERON:0001161	42.42	silver quality
nucleus accumbens	UBERON:0001882	42.26	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	42.15	gold quality
lower esophagus muscularis layer	UBERON:0035833	41.71	silver quality
anterior cingulate cortex	UBERON:0009835	41.64	silver quality
hypothalamus	UBERON:0001898	40.93	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.