LINC01853

Summary

LINC01853 (long intergenic non-protein coding RNA 1853, HGNC:52669) is a long non-coding RNA gene on chromosome 2q22.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52669
Approved symbol	LINC01853
Name	long intergenic non-protein coding RNA 1853
Location	2q22.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224028
Ensembl biotype	lncRNA
Entrez	105373647
RNAcentral	URS00026A1D63 — lncRNA, 1150 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000417715, ENST00000721964, ENST00000721965, ENST00000721966, ENST00000721967, ENST00000721968

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000417715 — 4 exons

Exon	Start	End
ENSE00001609825	140114042	140114104
ENSE00001612664	140103583	140103770
ENSE00001614856	140116391	140116444
ENSE00001747442	140131642	140131780

Expression profiles

Bgee: expression breadth broad, 27 present calls, max score 59.43.

Top tissues by expression

27 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
monocyte	CL:0000576	59.43	gold quality
blood	UBERON:0000178	59.29	gold quality
islet of Langerhans	UBERON:0000006	58.56	gold quality
prefrontal cortex	UBERON:0000451	55.84	gold quality
kidney	UBERON:0002113	49.31	gold quality
body of stomach	UBERON:0001161	49.18	gold quality
heart left ventricle	UBERON:0002084	47.35	gold quality
transverse colon	UBERON:0001157	45.95	gold quality
tibial artery	UBERON:0007610	45.91	silver quality
cerebellum	UBERON:0002037	44.09	silver quality
cerebellar hemisphere	UBERON:0002245	43.85	silver quality
spleen	UBERON:0002106	42.54	silver quality
stomach	UBERON:0000945	42.10	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	42.04	gold quality
adult mammalian kidney	UBERON:0000082	42.01	silver quality
subcutaneous adipose tissue	UBERON:0002190	41.31	silver quality
anterior cingulate cortex	UBERON:0009835	40.82	gold quality
nucleus accumbens	UBERON:0001882	40.20	silver quality
left lobe of thyroid gland	UBERON:0001120	38.47	silver quality
putamen	UBERON:0001874	37.00	silver quality
muscle layer of sigmoid colon	UBERON:0035805	36.41	silver quality
testis	UBERON:0000473	36.15	gold quality
left testis	UBERON:0004533	36.04	gold quality
hypothalamus	UBERON:0001898	35.10	silver quality
pituitary gland	UBERON:0000007	34.14	silver quality
right testis	UBERON:0004534	33.08	silver quality
tibial nerve	UBERON:0001323	32.03	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.80

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.