LINC01861

Summary

LINC01861 (long intergenic non-protein coding RNA 1861, HGNC:52680) is a long non-coding RNA gene on chromosome 5q33.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52680
Approved symbol	LINC01861
Name	long intergenic non-protein coding RNA 1861
Location	5q33.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251183
Ensembl biotype	lncRNA
Entrez	105378238
RNAcentral	URS0000364AFA — lncRNA, 537 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000509568

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000509568 — 4 exons

Exon	Start	End
ENSE00002034011	153898906	153898987
ENSE00002059970	153895541	153895785
ENSE00002067021	153887428	153887463
ENSE00002085676	153898187	153898360

Expression profiles

Bgee: expression breadth broad, 53 present calls, max score 54.88.

Top tissues by expression

53 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
gall bladder	UBERON:0002110	54.88	gold quality
monocyte	CL:0000576	54.61	gold quality
islet of Langerhans	UBERON:0000006	53.52	gold quality
putamen	UBERON:0001874	49.89	gold quality
Brodmann (1909) area 9	UBERON:0013540	49.18	gold quality
myometrium	UBERON:0001296	48.71	gold quality
right lobe of liver	UBERON:0001114	48.53	silver quality
gastrocnemius	UBERON:0001388	47.14	silver quality
Ammon’s horn	UBERON:0001954	45.65	gold quality
blood	UBERON:0000178	45.50	silver quality
heart	UBERON:0000948	45.29	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	45.13	gold quality
tibial artery	UBERON:0007610	44.58	silver quality
left coronary artery	UBERON:0001626	44.57	gold quality
amygdala	UBERON:0001876	44.22	gold quality
descending thoracic aorta	UBERON:0002345	43.96	silver quality
body of stomach	UBERON:0001161	43.78	silver quality
heart left ventricle	UBERON:0002084	43.68	silver quality
adrenal gland	UBERON:0002369	42.78	gold quality
hypothalamus	UBERON:0001898	42.66	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	42.50	silver quality
kidney	UBERON:0002113	42.20	silver quality
esophagus mucosa	UBERON:0002469	42.13	silver quality
thoracic aorta	UBERON:0001515	42.04	silver quality
pituitary gland	UBERON:0000007	41.84	gold quality
omental fat pad	UBERON:0010414	41.73	silver quality
ascending aorta	UBERON:0001496	41.56	silver quality
thyroid gland	UBERON:0002046	41.37	gold quality
right adrenal gland	UBERON:0001233	41.27	silver quality
muscle layer of sigmoid colon	UBERON:0035805	41.11	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.63

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.