LINC01865

Summary

LINC01865 (long intergenic non-protein coding RNA 1865, HGNC:52684) is a long non-coding RNA gene on chromosome 2p25.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52684
Approved symbol	LINC01865
Name	long intergenic non-protein coding RNA 1865
Location	2p25.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000233684
Ensembl biotype	lncRNA
Entrez	105373350
RNAcentral	URS0000BC4460 — lncRNA, 2100 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 16 — 16 lncRNA

ENST00000430529, ENST00000431911, ENST00000436808, ENST00000449119, ENST00000449621, ENST00000715298, ENST00000715299, ENST00000715300, ENST00000715301, ENST00000715302, ENST00000715303, ENST00000715304, ENST00000715335, ENST00000715336, ENST00000775791, ENST00000775792

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000430529 — 2 exons

Exon	Start	End
ENSE00001742517	335773	336465
ENSE00001752279	317912	318063

Expression profiles

Bgee: expression breadth broad, 91 present calls, max score 86.94.

Top tissues by expression

91 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.94	gold quality
duodenum	UBERON:0002114	61.37	gold quality
sural nerve	UBERON:0015488	58.89	silver quality
urinary bladder	UBERON:0001255	58.21	gold quality
monocyte	CL:0000576	56.15	gold quality
prefrontal cortex	UBERON:0000451	54.63	gold quality
lymph node	UBERON:0000029	54.02	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	53.94	gold quality
nucleus accumbens	UBERON:0001882	53.25	gold quality
islet of Langerhans	UBERON:0000006	52.95	gold quality
metanephros cortex	UBERON:0010533	52.01	gold quality
placenta	UBERON:0001987	51.19	gold quality
pancreas	UBERON:0001264	50.11	gold quality
kidney	UBERON:0002113	49.92	gold quality
frontal cortex	UBERON:0001870	49.53	gold quality
blood	UBERON:0000178	49.02	silver quality
ascending aorta	UBERON:0001496	48.55	gold quality
bone marrow	UBERON:0002371	48.55	silver quality
adult mammalian kidney	UBERON:0000082	48.00	gold quality
thoracic aorta	UBERON:0001515	47.93	gold quality
amygdala	UBERON:0001876	47.85	gold quality
cerebral cortex	UBERON:0000956	47.68	gold quality
cerebellum	UBERON:0002037	47.45	gold quality
brain	UBERON:0000955	47.37	gold quality
cerebellar hemisphere	UBERON:0002245	47.31	gold quality
anterior cingulate cortex	UBERON:0009835	46.97	gold quality
superior frontal gyrus	UBERON:0002661	46.90	gold quality
liver	UBERON:0002107	46.57	silver quality
Brodmann (1909) area 9	UBERON:0013540	46.26	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	46.18	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.