LINC01870

Summary

LINC01870 (long intergenic non-protein coding RNA 1870, HGNC:52689) is a long non-coding RNA gene on chromosome 2q11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52689
Approved symbol	LINC01870
Name	long intergenic non-protein coding RNA 1870
Location	2q11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000223826
Ensembl biotype	lncRNA
Entrez	107985925
RNAcentral	URS0002A52629 — lncRNA, 836 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000427042, ENST00000831935, ENST00000831936, ENST00000831937

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000427042 — 3 exons

Exon	Start	End
ENSE00001773434	101486734	101486822
ENSE00001786360	101485419	101485615
ENSE00001787341	101479390	101479493

Expression profiles

Bgee: expression breadth broad, 54 present calls, max score 62.88.

Top tissues by expression

54 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
prefrontal cortex	UBERON:0000451	62.88	gold quality
endometrium	UBERON:0001295	59.30	silver quality
left coronary artery	UBERON:0001626	55.32	gold quality
islet of Langerhans	UBERON:0000006	55.14	gold quality
blood	UBERON:0000178	54.92	gold quality
left adrenal gland cortex	UBERON:0035825	52.92	gold quality
body of pancreas	UBERON:0001150	51.52	gold quality
heart	UBERON:0000948	51.45	gold quality
heart left ventricle	UBERON:0002084	50.79	gold quality
ascending aorta	UBERON:0001496	48.43	gold quality
frontal cortex	UBERON:0001870	48.23	gold quality
left adrenal gland	UBERON:0001234	47.94	gold quality
omental fat pad	UBERON:0010414	47.18	gold quality
ovary	UBERON:0000992	47.07	gold quality
transverse colon	UBERON:0001157	46.99	gold quality
adrenal tissue	UBERON:0018303	46.48	silver quality
tibial artery	UBERON:0007610	46.42	gold quality
adult mammalian kidney	UBERON:0000082	46.00	gold quality
adipose tissue	UBERON:0001013	46.00	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	45.97	gold quality
lower esophagus muscularis layer	UBERON:0035833	45.36	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	45.33	gold quality
right atrium auricular region	UBERON:0006631	45.09	gold quality
muscle layer of sigmoid colon	UBERON:0035805	44.85	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	43.90	gold quality
kidney	UBERON:0002113	43.74	gold quality
right adrenal gland cortex	UBERON:0035827	43.54	gold quality
anterior cingulate cortex	UBERON:0009835	43.29	gold quality
skin of abdomen	UBERON:0001416	43.12	gold quality
thyroid gland	UBERON:0002046	42.82	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.80

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.