LINC01873

Summary

LINC01873 (long intergenic non-protein coding RNA 1873, HGNC:52692) is a long non-coding RNA gene on chromosome 2p14.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52692
Approved symbol	LINC01873
Name	long intergenic non-protein coding RNA 1873
Location	2p14
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000232164
Ensembl biotype	lncRNA
Entrez	729348
RNAcentral	URS00003FE2C3 — lncRNA, 1679 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000428647

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000428647 — 3 exons

Exon	Start	End
ENSE00001661194	66383306	66383349
ENSE00001786309	66389399	66389495
ENSE00001789569	66390913	66392450

Expression profiles

Bgee: expression breadth ubiquitous, 103 present calls, max score 77.97.

Top tissues by expression

103 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	77.97	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.95	gold quality
sural nerve	UBERON:0015488	74.12	gold quality
liver	UBERON:0002107	69.20	gold quality
tonsil	UBERON:0002372	69.00	gold quality
ventricular zone	UBERON:0003053	68.53	gold quality
bone marrow cell	CL:0002092	67.66	silver quality
skeletal muscle tissue	UBERON:0001134	66.72	gold quality
muscle tissue	UBERON:0002385	62.63	gold quality
ganglionic eminence	UBERON:0004023	60.58	gold quality
urinary bladder	UBERON:0001255	58.55	gold quality
cortical plate	UBERON:0005343	58.43	silver quality
blood	UBERON:0000178	55.48	gold quality
small intestine	UBERON:0002108	54.98	gold quality
kidney	UBERON:0002113	53.64	gold quality
pancreas	UBERON:0001264	53.53	gold quality
testis	UBERON:0000473	53.21	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	51.85	gold quality
ectocervix	UBERON:0012249	51.75	gold quality
uterine cervix	UBERON:0000002	51.24	gold quality
prefrontal cortex	UBERON:0000451	50.89	silver quality
monocyte	CL:0000576	50.67	silver quality
placenta	UBERON:0001987	50.53	gold quality
frontal cortex	UBERON:0001870	48.58	gold quality
ovary	UBERON:0000992	48.55	gold quality
cortex of kidney	UBERON:0001225	48.39	silver quality
endometrium	UBERON:0001295	47.93	gold quality
myometrium	UBERON:0001296	47.57	silver quality
muscle of leg	UBERON:0001383	47.53	silver quality
gastrocnemius	UBERON:0001388	47.32	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.56

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.