LINC01875

Summary

LINC01875 (long intergenic non-protein coding RNA 1875, HGNC:52694) is a long non-coding RNA gene on chromosome 2p25.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52694
Approved symbol	LINC01875
Name	long intergenic non-protein coding RNA 1875
Location	2p25.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000225942
Ensembl biotype	lncRNA
Entrez	101927362
RNAcentral	URS0002A6E1FD — lncRNA, 668 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000454477

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000454477 — 2 exons

Exon	Start	End
ENSE00004200047	546240	546675
ENSE00004200048	545805	546036

Expression profiles

Bgee: expression breadth broad, 19 present calls, max score 70.22.

Top tissues by expression

152 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	70.22	gold quality
tendon of biceps brachii	UBERON:0008188	66.59	gold quality
hindlimb stylopod muscle	UBERON:0004252	66.24	gold quality
upper leg skin	UBERON:0004262	61.96	silver quality
Brodmann (1909) area 23	UBERON:0013554	59.30	gold quality
middle temporal gyrus	UBERON:0002771	59.27	gold quality
primary visual cortex	UBERON:0002436	59.09	gold quality
gingival epithelium	UBERON:0001949	58.19	gold quality
esophagus squamous epithelium	UBERON:0006920	56.61	gold quality
gingiva	UBERON:0001828	56.60	gold quality
endothelial cell	CL:0000115	56.01	gold quality
parotid gland	UBERON:0001831	54.48	gold quality
medial globus pallidus	UBERON:0002477	54.42	gold quality
oviduct epithelium	UBERON:0004804	54.16	gold quality
vagina	UBERON:0000996	53.65	silver quality
skin of hip	UBERON:0001554	52.70	silver quality
occipital lobe	UBERON:0002021	51.38	gold quality
globus pallidus	UBERON:0001875	51.33	gold quality
fallopian tube	UBERON:0003889	49.53	gold quality
right lobe of thyroid gland	UBERON:0001119	48.20	silver quality
tonsil	UBERON:0002372	46.53	gold quality
entorhinal cortex	UBERON:0002728	45.93	gold quality
amniotic fluid	UBERON:0000173	45.48	gold quality
gastrocnemius	UBERON:0001388	45.21	silver quality
prefrontal cortex	UBERON:0000451	44.16	gold quality
left lobe of thyroid gland	UBERON:0001120	43.73	gold quality
adult mammalian kidney	UBERON:0000082	43.71	silver quality
left adrenal gland	UBERON:0001234	43.59	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
thyroid gland	UBERON:0002046	43.16	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.57

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.