LINC01876

Summary

LINC01876 (long intergenic non-protein coding RNA 1876, HGNC:52695) is a long non-coding RNA gene on chromosome 2q24.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52695
Approved symbol	LINC01876
Name	long intergenic non-protein coding RNA 1876
Location	2q24.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	uc.83
Ensembl gene	ENSG00000226383
Ensembl biotype	lncRNA
Entrez	101929378
RNAcentral	URS00007E3E6D — lncRNA, 1773 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 34 — 34 lncRNA

ENST00000428651, ENST00000448255, ENST00000634100, ENST00000635799, ENST00000636956, ENST00000637324, ENST00000637476, ENST00000637554, ENST00000637665, ENST00000638047, ENST00000657334, ENST00000659502, ENST00000661513, ENST00000662073, ENST00000824378, ENST00000824379, ENST00000824380, ENST00000824381, ENST00000824382, ENST00000824383, ENST00000824384, ENST00000824385, ENST00000824386, ENST00000824387, ENST00000824388, ENST00000824389, ENST00000824390, ENST00000824391, ENST00000824392, ENST00000824393, ENST00000824394, ENST00000824395, ENST00000824396, ENST00000824493

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000428651 — 4 exons

Exon	Start	End
ENSE00001598093	156022672	156022817
ENSE00001745665	156024485	156024576
ENSE00003793416	156020540	156021899
ENSE00003852061	156254778	156254936

Expression profiles

Bgee: expression breadth ubiquitous, 148 present calls, max score 83.61.

Top tissues by expression

240 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.61	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	82.24	gold quality
bone marrow cell	CL:0002092	80.33	gold quality
sural nerve	UBERON:0015488	73.13	gold quality
colonic epithelium	UBERON:0000397	69.59	gold quality
ventricular zone	UBERON:0003053	67.90	gold quality
islet of Langerhans	UBERON:0000006	64.61	gold quality
body of pancreas	UBERON:0001150	64.48	gold quality
body of stomach	UBERON:0001161	64.17	gold quality
stomach	UBERON:0000945	64.15	gold quality
pancreas	UBERON:0001264	63.91	gold quality
ganglionic eminence	UBERON:0004023	63.72	gold quality
right uterine tube	UBERON:0001302	63.27	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	63.27	gold quality
esophagus mucosa	UBERON:0002469	62.93	gold quality
rectum	UBERON:0001052	62.52	gold quality
hindlimb stylopod muscle	UBERON:0004252	62.42	gold quality
ectocervix	UBERON:0012249	62.36	gold quality
minor salivary gland	UBERON:0001830	61.67	gold quality
adrenal tissue	UBERON:0018303	61.55	gold quality
cortical plate	UBERON:0005343	61.47	gold quality
stromal cell of endometrium	CL:0002255	61.46	gold quality
skin of abdomen	UBERON:0001416	60.97	gold quality
skin of leg	UBERON:0001511	60.24	gold quality
transverse colon	UBERON:0001157	59.53	gold quality
mucosa of stomach	UBERON:0001199	59.52	gold quality
saliva-secreting gland	UBERON:0001044	58.99	gold quality
vagina	UBERON:0000996	58.87	gold quality
mouth mucosa	UBERON:0003729	58.79	gold quality
uterine cervix	UBERON:0000002	58.23	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	4.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.