LINC01883

Summary

LINC01883 (long intergenic non-protein coding RNA 1883, HGNC:52702) is a long non-coding RNA gene on chromosome 2p22.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52702
Approved symbol	LINC01883
Name	long intergenic non-protein coding RNA 1883
Location	2p22.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000235009
Ensembl biotype	lncRNA
Entrez	100996902
RNAcentral	URS0000BC4484 — lncRNA, 396 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 11 — 11 lncRNA

ENST00000457385, ENST00000661715, ENST00000738062, ENST00000738063, ENST00000738064, ENST00000738065, ENST00000738066, ENST00000738466, ENST00000738467, ENST00000738468, ENST00000738469

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000457385 — 2 exons

Exon	Start	End
ENSE00004073657	38433339	38433599
ENSE00004073660	38431253	38431438

Expression profiles

Bgee: expression breadth broad, 88 present calls, max score 95.80.

Top tissues by expression

194 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	95.80	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.46	gold quality
sperm	CL:0000019	80.20	gold quality
left testis	UBERON:0004533	73.46	gold quality
right testis	UBERON:0004534	71.85	gold quality
testis	UBERON:0000473	70.62	gold quality
hindlimb stylopod muscle	UBERON:0004252	68.95	gold quality
endothelial cell	CL:0000115	61.84	gold quality
sural nerve	UBERON:0015488	59.78	silver quality
muscle of leg	UBERON:0001383	56.54	gold quality
calcaneal tendon	UBERON:0003701	55.68	silver quality
gastrocnemius	UBERON:0001388	55.62	gold quality
muscle layer of sigmoid colon	UBERON:0035805	51.04	gold quality
right lobe of liver	UBERON:0001114	50.56	gold quality
ectocervix	UBERON:0012249	49.16	gold quality
skin of abdomen	UBERON:0001416	48.06	gold quality
cerebellar cortex	UBERON:0002129	47.86	gold quality
skin of leg	UBERON:0001511	47.77	gold quality
lower esophagus	UBERON:0013473	47.44	gold quality
lower esophagus muscularis layer	UBERON:0035833	47.21	gold quality
ascending aorta	UBERON:0001496	47.01	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	46.58	gold quality
zone of skin	UBERON:0000014	46.55	gold quality
tibial artery	UBERON:0007610	46.50	gold quality
colon	UBERON:0001155	46.21	gold quality
body of stomach	UBERON:0001161	46.15	gold quality
aorta	UBERON:0000947	46.10	gold quality
amniotic fluid	UBERON:0000173	45.94	gold quality
prefrontal cortex	UBERON:0000451	45.88	gold quality
anatomical system	UBERON:0000467	45.82	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.