LINC01884

Summary

LINC01884 (long intergenic non-protein coding RNA 1884, HGNC:52703) is a long non-coding RNA gene on chromosome 2p24.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52703
Approved symbol	LINC01884
Name	long intergenic non-protein coding RNA 1884
Location	2p24.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000233587
Ensembl biotype	lncRNA
Entrez	102723362
RNAcentral	URS00003ECBA1 — lncRNA, 440 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 13 — 13 lncRNA

ENST00000433429, ENST00000653854, ENST00000654407, ENST00000655510, ENST00000657386, ENST00000665651, ENST00000669816, ENST00000670184, ENST00000671077, ENST00000833461, ENST00000833462, ENST00000833463, ENST00000833464

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000433429 — 3 exons

Exon	Start	End
ENSE00001643751	22537005	22537188
ENSE00001656628	22538080	22538291
ENSE00003878772	22536391	22536525

Expression profiles

Bgee: expression breadth broad, 41 present calls, max score 86.97.

Top tissues by expression

41 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.97	gold quality
left testis	UBERON:0004533	69.30	gold quality
testis	UBERON:0000473	68.86	gold quality
right testis	UBERON:0004534	68.53	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	65.76	gold quality
calcaneal tendon	UBERON:0003701	63.87	gold quality
monocyte	CL:0000576	62.34	gold quality
multicellular organism	UBERON:0000468	60.32	gold quality
blood	UBERON:0000178	53.62	gold quality
gastrocnemius	UBERON:0001388	49.13	gold quality
putamen	UBERON:0001874	48.15	gold quality
anterior cingulate cortex	UBERON:0009835	46.96	gold quality
omental fat pad	UBERON:0010414	45.21	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	44.65	gold quality
tibial artery	UBERON:0007610	43.97	silver quality
spleen	UBERON:0002106	43.88	silver quality
Ammon’s horn	UBERON:0001954	43.68	silver quality
right frontal lobe	UBERON:0002810	43.17	gold quality
nucleus accumbens	UBERON:0001882	42.64	gold quality
right lobe of thyroid gland	UBERON:0001119	42.59	silver quality
tibial nerve	UBERON:0001323	42.43	gold quality
right atrium auricular region	UBERON:0006631	42.14	silver quality
body of stomach	UBERON:0001161	42.06	silver quality
lung	UBERON:0002048	41.81	gold quality
esophagus mucosa	UBERON:0002469	41.76	silver quality
left coronary artery	UBERON:0001626	41.69	silver quality
thoracic aorta	UBERON:0001515	41.04	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	40.87	silver quality
ascending aorta	UBERON:0001496	40.48	silver quality
left adrenal gland	UBERON:0001234	39.26	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.80

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.