LINC01885

Summary

LINC01885 (long intergenic non-protein coding RNA 1885, HGNC:52704) is a long non-coding RNA gene on chromosome 2q12.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52704
Approved symbol	LINC01885
Name	long intergenic non-protein coding RNA 1885
Location	2q12.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000237880
Ensembl biotype	lncRNA
Entrez	105373538
RNAcentral	URS00026A253E — lncRNA, 2042 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000414300, ENST00000654481, ENST00000767864, ENST00000767865, ENST00000767866, ENST00000767867

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000414300 — 6 exons

Exon	Start	End
ENSE00001614724	107542439	107542649
ENSE00001681554	107386743	107386864
ENSE00001758973	107416695	107416783
ENSE00001779879	107385447	107385734
ENSE00001780522	107528781	107528864
ENSE00003872157	107382715	107384013

Expression profiles

Bgee: expression breadth broad, 50 present calls, max score 83.88.

Top tissues by expression

50 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	83.88	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.43	silver quality
islet of Langerhans	UBERON:0000006	61.97	gold quality
amygdala	UBERON:0001876	57.64	gold quality
temporal lobe	UBERON:0001871	57.59	gold quality
ganglionic eminence	UBERON:0004023	57.50	silver quality
prefrontal cortex	UBERON:0000451	57.26	gold quality
right lobe of thyroid gland	UBERON:0001119	56.65	gold quality
thyroid gland	UBERON:0002046	56.49	gold quality
superior frontal gyrus	UBERON:0002661	55.69	gold quality
left lobe of thyroid gland	UBERON:0001120	54.99	gold quality
pancreas	UBERON:0001264	54.68	gold quality
anterior cingulate cortex	UBERON:0009835	53.94	gold quality
Ammon’s horn	UBERON:0001954	52.76	gold quality
frontal cortex	UBERON:0001870	52.67	gold quality
cerebral cortex	UBERON:0000956	51.61	gold quality
corpus callosum	UBERON:0002336	51.57	gold quality
myometrium	UBERON:0001296	50.78	silver quality
multicellular organism	UBERON:0000468	50.45	gold quality
brain	UBERON:0000955	50.27	gold quality
primary visual cortex	UBERON:0002436	49.19	silver quality
Brodmann (1909) area 9	UBERON:0013540	48.52	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	48.50	gold quality
cortex of kidney	UBERON:0001225	48.44	silver quality
monocyte	CL:0000576	48.29	silver quality
lymph node	UBERON:0000029	48.09	silver quality
caudate nucleus	UBERON:0001873	48.02	gold quality
substantia nigra	UBERON:0002038	47.99	gold quality
muscle of leg	UBERON:0001383	47.72	silver quality
right hemisphere of cerebellum	UBERON:0014890	46.97	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.63

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.