LINC01894

Summary

LINC01894 (long intergenic non-protein coding RNA 1894, HGNC:52713) is a long non-coding RNA gene on chromosome 18q11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52713
Approved symbol	LINC01894
Name	long intergenic non-protein coding RNA 1894
Location	18q11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000264345
Ensembl biotype	lncRNA
Entrez	105372030
RNAcentral	URS0000BC44F2 — lncRNA, 1497 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 13 — 13 lncRNA

ENST00000580984, ENST00000582697, ENST00000665916, ENST00000670277, ENST00000670369, ENST00000781982, ENST00000781983, ENST00000781984, ENST00000781985, ENST00000781986, ENST00000781987, ENST00000781988, ENST00000781989

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000580984 — 2 exons

Exon	Start	End
ENSE00002717367	24987357	24987682
ENSE00002719705	24933487	24933647

Expression profiles

Bgee: expression breadth ubiquitous, 114 present calls, max score 88.79.

Top tissues by expression

118 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.79	gold quality
quadriceps femoris	UBERON:0001377	80.63	gold quality
hindlimb stylopod muscle	UBERON:0004252	70.72	gold quality
bone marrow	UBERON:0002371	70.35	silver quality
thymus	UBERON:0002370	70.22	silver quality
adrenal tissue	UBERON:0018303	69.99	gold quality
right atrium auricular region	UBERON:0006631	69.55	gold quality
skeletal muscle tissue	UBERON:0001134	69.34	gold quality
cerebellar vermis	UBERON:0004720	67.75	gold quality
gastrocnemius	UBERON:0001388	66.46	gold quality
muscle of leg	UBERON:0001383	66.41	gold quality
spleen	UBERON:0002106	64.50	gold quality
ganglionic eminence	UBERON:0004023	62.20	gold quality
heart	UBERON:0000948	60.36	gold quality
gall bladder	UBERON:0002110	58.42	gold quality
prefrontal cortex	UBERON:0000451	58.36	gold quality
calcaneal tendon	UBERON:0003701	58.05	gold quality
monocyte	CL:0000576	56.60	gold quality
smooth muscle tissue	UBERON:0001135	56.60	gold quality
urinary bladder	UBERON:0001255	55.89	gold quality
omental fat pad	UBERON:0010414	55.69	gold quality
adipose tissue	UBERON:0001013	55.44	gold quality
superior frontal gyrus	UBERON:0002661	55.43	gold quality
placenta	UBERON:0001987	55.34	gold quality
subcutaneous adipose tissue	UBERON:0002190	55.08	gold quality
cortex of kidney	UBERON:0001225	54.93	gold quality
blood	UBERON:0000178	54.71	gold quality
tonsil	UBERON:0002372	54.68	gold quality
apex of heart	UBERON:0002098	54.46	gold quality
endometrium	UBERON:0001295	54.14	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.58

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.