LINC01897

Summary

LINC01897 (long intergenic non-protein coding RNA 1897, HGNC:52716) is a long non-coding RNA gene on chromosome 18q21.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52716
Approved symbol	LINC01897
Name	long intergenic non-protein coding RNA 1897
Location	18q21.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267209
Ensembl biotype	lncRNA
Entrez	124904311
RNAcentral	URS000045C265 — lncRNA, 369 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000585702, ENST00000588449, ENST00000591503

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000585702 — 3 exons

Exon	Start	End
ENSE00002744074	57961231	57961406
ENSE00002798446	57963450	57963518
ENSE00002901013	57964399	57964434

Expression profiles

Bgee: expression breadth broad, 76 present calls, max score 87.92.

Top tissues by expression

76 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.92	gold quality
right lobe of thyroid gland	UBERON:0001119	66.81	gold quality
gastrocnemius	UBERON:0001388	60.44	gold quality
blood	UBERON:0000178	59.85	gold quality
superior frontal gyrus	UBERON:0002661	59.71	gold quality
monocyte	CL:0000576	57.91	gold quality
mucosa of transverse colon	UBERON:0004991	56.97	gold quality
body of pancreas	UBERON:0001150	54.58	gold quality
calcaneal tendon	UBERON:0003701	54.07	gold quality
heart left ventricle	UBERON:0002084	53.78	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	53.42	gold quality
fallopian tube	UBERON:0003889	53.27	gold quality
tonsil	UBERON:0002372	52.98	gold quality
heart	UBERON:0000948	52.95	gold quality
tibial artery	UBERON:0007610	52.92	gold quality
urinary bladder	UBERON:0001255	52.85	gold quality
right lobe of liver	UBERON:0001114	52.25	gold quality
ascending aorta	UBERON:0001496	51.89	gold quality
endometrium	UBERON:0001295	51.66	gold quality
adult mammalian kidney	UBERON:0000082	51.36	gold quality
myometrium	UBERON:0001296	51.21	gold quality
subcutaneous adipose tissue	UBERON:0002190	51.16	gold quality
body of stomach	UBERON:0001161	51.04	gold quality
ectocervix	UBERON:0012249	50.90	gold quality
esophagus mucosa	UBERON:0002469	50.82	gold quality
omental fat pad	UBERON:0010414	50.35	gold quality
esophagus	UBERON:0001043	50.33	gold quality
stomach	UBERON:0000945	50.07	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	50.03	gold quality
adrenal tissue	UBERON:0018303	49.84	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.79

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.