LINC01901

Summary

LINC01901 (long intergenic non-protein coding RNA 1901, HGNC:52720) is a long non-coding RNA gene on chromosome 18q12.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52720
Approved symbol	LINC01901
Name	long intergenic non-protein coding RNA 1901
Location	18q12.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267413
Ensembl biotype	lncRNA
Entrez	105372080
RNAcentral	URS00026A28A0 — lncRNA, 1928 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000585822, ENST00000793172, ENST00000793173, ENST00000793174, ENST00000793175, ENST00000793176, ENST00000793177

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000585822 — 5 exons

Exon	Start	End
ENSE00002804534	39862144	39862249
ENSE00002804862	39921799	39921829
ENSE00002833642	39924654	39924840
ENSE00002949581	39876304	39876395
ENSE00002971026	39841174	39841872

Expression profiles

Bgee: expression breadth broad, 57 present calls, max score 84.94.

Top tissues by expression

57 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.94	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	83.56	gold quality
placenta	UBERON:0001987	60.12	gold quality
ganglionic eminence	UBERON:0004023	59.43	gold quality
cortical plate	UBERON:0005343	55.20	silver quality
prefrontal cortex	UBERON:0000451	52.97	gold quality
stomach	UBERON:0000945	51.08	gold quality
islet of Langerhans	UBERON:0000006	50.95	gold quality
pancreas	UBERON:0001264	50.26	gold quality
blood	UBERON:0000178	49.14	gold quality
frontal cortex	UBERON:0001870	48.59	gold quality
hypothalamus	UBERON:0001898	48.05	gold quality
cortex of kidney	UBERON:0001225	47.92	silver quality
thyroid gland	UBERON:0002046	47.54	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	46.39	silver quality
tibial artery	UBERON:0007610	46.27	gold quality
nucleus accumbens	UBERON:0001882	45.63	gold quality
multicellular organism	UBERON:0000468	44.77	gold quality
omental fat pad	UBERON:0010414	44.61	gold quality
right atrium auricular region	UBERON:0006631	44.56	silver quality
adipose tissue	UBERON:0001013	44.51	gold quality
cerebral cortex	UBERON:0000956	44.33	gold quality
subcutaneous adipose tissue	UBERON:0002190	44.07	gold quality
popliteal artery	UBERON:0002250	43.80	gold quality
gall bladder	UBERON:0002110	43.75	silver quality
body of pancreas	UBERON:0001150	43.67	silver quality
fallopian tube	UBERON:0003889	43.34	gold quality
skin of leg	UBERON:0001511	43.07	silver quality
Brodmann (1909) area 9	UBERON:0013540	42.73	silver quality
caudate nucleus	UBERON:0001873	42.60	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.14

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.