LINC01906

Summary

LINC01906 (long intergenic non-protein coding RNA 1906, HGNC:52725) is a long non-coding RNA gene on chromosome 18p11.21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52725
Approved symbol	LINC01906
Name	long intergenic non-protein coding RNA 1906
Location	18p11.21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000265786
Ensembl biotype	lncRNA
Entrez	105372009
RNAcentral	URS00021231D5 — lncRNA, 477 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000582962

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000582962 — 4 exons

Exon	Start	End
ENSE00002697761	14877831	14877931
ENSE00002705511	14883833	14884052
ENSE00002729161	14883528	14883652
ENSE00002733692	14877611	14877663

Expression profiles

Bgee: expression breadth broad, 81 present calls, max score 86.46.

Top tissues by expression

81 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.46	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	70.82	gold quality
monocyte	CL:0000576	57.26	gold quality
duodenum	UBERON:0002114	56.66	gold quality
left testis	UBERON:0004533	56.51	gold quality
testis	UBERON:0000473	56.11	gold quality
right testis	UBERON:0004534	54.45	gold quality
liver	UBERON:0002107	53.53	gold quality
right lobe of liver	UBERON:0001114	52.60	silver quality
islet of Langerhans	UBERON:0000006	52.39	gold quality
blood	UBERON:0000178	51.75	gold quality
adrenal tissue	UBERON:0018303	50.75	silver quality
prefrontal cortex	UBERON:0000451	48.77	gold quality
Brodmann (1909) area 9	UBERON:0013540	48.08	gold quality
body of pancreas	UBERON:0001150	47.62	gold quality
ectocervix	UBERON:0012249	47.36	gold quality
muscle of leg	UBERON:0001383	46.76	gold quality
multicellular organism	UBERON:0000468	46.56	gold quality
corpus callosum	UBERON:0002336	46.56	silver quality
right ovary	UBERON:0002118	46.40	gold quality
gastrocnemius	UBERON:0001388	46.12	silver quality
adult mammalian kidney	UBERON:0000082	45.79	gold quality
tibial artery	UBERON:0007610	45.62	silver quality
body of uterus	UBERON:0009853	45.27	gold quality
heart left ventricle	UBERON:0002084	44.08	silver quality
left coronary artery	UBERON:0001626	43.99	gold quality
thoracic aorta	UBERON:0001515	43.91	gold quality
amygdala	UBERON:0001876	43.89	silver quality
ascending aorta	UBERON:0001496	43.64	gold quality
right frontal lobe	UBERON:0002810	43.50	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.82

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.