LINC01911

Summary

LINC01911 (long intergenic non-protein coding RNA 1911, HGNC:52730) is a long non-coding RNA gene on chromosome 2q22.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52730
Approved symbol	LINC01911
Name	long intergenic non-protein coding RNA 1911
Location	2q22.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231040
Ensembl biotype	lncRNA
Entrez	105373669
RNAcentral	URS00026A1ECF — lncRNA, 1880 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 15 — 15 lncRNA

ENST00000436245, ENST00000450667, ENST00000653628, ENST00000654420, ENST00000654856, ENST00000655662, ENST00000656564, ENST00000661603, ENST00000662656, ENST00000667114, ENST00000667356, ENST00000669097, ENST00000670621, ENST00000696349, ENST00000696350

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000436245 — 5 exons

Exon	Start	End
ENSE00001608371	146879909	146879949
ENSE00001648426	146898184	146898218
ENSE00001699137	146880782	146880899
ENSE00003967106	146883204	146883277
ENSE00003967108	146888087	146888173

Expression profiles

Bgee: expression breadth broad, 38 present calls, max score 84.74.

Top tissues by expression

38 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.74	gold quality
liver	UBERON:0002107	65.97	silver quality
left testis	UBERON:0004533	61.83	gold quality
testis	UBERON:0000473	61.50	gold quality
right testis	UBERON:0004534	59.37	gold quality
multicellular organism	UBERON:0000468	55.06	gold quality
saliva-secreting gland	UBERON:0001044	52.71	gold quality
blood	UBERON:0000178	52.41	silver quality
monocyte	CL:0000576	49.40	silver quality
adult mammalian kidney	UBERON:0000082	48.20	gold quality
cortex of kidney	UBERON:0001225	47.58	silver quality
gastrocnemius	UBERON:0001388	47.41	gold quality
placenta	UBERON:0001987	46.79	silver quality
subcutaneous adipose tissue	UBERON:0002190	45.29	gold quality
transverse colon	UBERON:0001157	45.00	gold quality
heart	UBERON:0000948	44.54	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	44.49	gold quality
ascending aorta	UBERON:0001496	43.48	gold quality
adipose tissue	UBERON:0001013	43.46	silver quality
heart left ventricle	UBERON:0002084	43.43	silver quality
zone of skin	UBERON:0000014	42.94	silver quality
omental fat pad	UBERON:0010414	42.89	silver quality
skin of leg	UBERON:0001511	42.28	silver quality
lower esophagus muscularis layer	UBERON:0035833	42.13	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	41.77	silver quality
skin of abdomen	UBERON:0001416	41.75	silver quality
right frontal lobe	UBERON:0002810	41.52	gold quality
tibial artery	UBERON:0007610	40.45	silver quality
body of stomach	UBERON:0001161	40.19	silver quality
stomach	UBERON:0000945	40.03	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.77

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.