LINC01919

Summary

LINC01919 (long intergenic non-protein coding RNA 1919, HGNC:52739) is a long non-coding RNA gene on chromosome 18q21.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52739
Approved symbol	LINC01919
Name	long intergenic non-protein coding RNA 1919
Location	18q21.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000263438
Ensembl biotype	lncRNA
Entrez	102724651
RNAcentral	URS00002CF244 — lncRNA, 568 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 19 — 19 lncRNA

ENST00000578610, ENST00000579506, ENST00000581198, ENST00000654465, ENST00000655896, ENST00000658566, ENST00000663332, ENST00000665439, ENST00000667052, ENST00000669727, ENST00000671590, ENST00000769768, ENST00000769769, ENST00000769770, ENST00000769771, ENST00000769772, ENST00000769773, ENST00000769774, ENST00000769775

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000578610 — 6 exons

Exon	Start	End
ENSE00002686063	53597793	53597851
ENSE00002689967	53578073	53578121
ENSE00002704778	53594805	53594883
ENSE00002712813	53582594	53582706
ENSE00002712922	53568447	53568550
ENSE00002722810	53584186	53584349

Expression profiles

Bgee: expression breadth ubiquitous, 118 present calls, max score 76.79.

Top tissues by expression

118 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.79	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	71.01	gold quality
left testis	UBERON:0004533	70.87	gold quality
testis	UBERON:0000473	70.58	gold quality
right testis	UBERON:0004534	70.44	gold quality
bone marrow cell	CL:0002092	68.36	silver quality
ganglionic eminence	UBERON:0004023	68.23	gold quality
sural nerve	UBERON:0015488	67.83	gold quality
ventricular zone	UBERON:0003053	66.00	gold quality
bone marrow	UBERON:0002371	60.32	silver quality
calcaneal tendon	UBERON:0003701	56.89	gold quality
duodenum	UBERON:0002114	54.91	gold quality
blood	UBERON:0000178	54.80	gold quality
monocyte	CL:0000576	54.47	gold quality
leukocyte	CL:0000738	53.98	gold quality
tonsil	UBERON:0002372	53.96	gold quality
stromal cell of endometrium	CL:0002255	53.73	silver quality
tibial nerve	UBERON:0001323	53.71	gold quality
right lung	UBERON:0002167	53.43	gold quality
gall bladder	UBERON:0002110	53.41	gold quality
adrenal tissue	UBERON:0018303	53.14	gold quality
lymph node	UBERON:0000029	52.55	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	52.50	gold quality
endometrium	UBERON:0001295	52.43	gold quality
liver	UBERON:0002107	52.09	gold quality
uterine cervix	UBERON:0000002	51.27	gold quality
islet of Langerhans	UBERON:0000006	51.13	gold quality
endocervix	UBERON:0000458	50.86	gold quality
muscle of leg	UBERON:0001383	50.64	gold quality
right lobe of liver	UBERON:0001114	50.43	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.59

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.