LINC01923

Summary

LINC01923 (long intergenic non-protein coding RNA 1923, HGNC:52742) is a long non-coding RNA gene on chromosome 2q33.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52742
Approved symbol	LINC01923
Name	long intergenic non-protein coding RNA 1923
Location	2q33.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236653
Ensembl biotype	lncRNA
Entrez	101927619
RNAcentral	URS000075B081 — lncRNA, 2811 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000443261, ENST00000451266, ENST00000456248, ENST00000658157, ENST00000659638, ENST00000757777

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000443261 — 4 exons

Exon	Start	End
ENSE00001717791	198374476	198374617
ENSE00001725495	198374883	198375116
ENSE00003793740	198354614	198354698
ENSE00003799833	198353686	198353816

Expression profiles

Bgee: expression breadth ubiquitous, 104 present calls, max score 77.46.

Top tissues by expression

104 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.46	gold quality
sural nerve	UBERON:0015488	69.63	silver quality
cortical plate	UBERON:0005343	67.80	gold quality
stromal cell of endometrium	CL:0002255	64.75	gold quality
liver	UBERON:0002107	60.95	gold quality
cortex of kidney	UBERON:0001225	60.52	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.20	gold quality
leukocyte	CL:0000738	59.78	gold quality
monocyte	CL:0000576	59.27	gold quality
superior frontal gyrus	UBERON:0002661	59.13	gold quality
prefrontal cortex	UBERON:0000451	58.94	gold quality
lymph node	UBERON:0000029	58.65	gold quality
mucosa of transverse colon	UBERON:0004991	58.25	gold quality
right lobe of liver	UBERON:0001114	57.01	gold quality
primary visual cortex	UBERON:0002436	55.35	gold quality
frontal cortex	UBERON:0001870	54.97	gold quality
calcaneal tendon	UBERON:0003701	53.91	silver quality
endometrium	UBERON:0001295	53.05	gold quality
bone marrow	UBERON:0002371	52.91	silver quality
cerebral cortex	UBERON:0000956	52.87	gold quality
blood	UBERON:0000178	52.38	gold quality
skeletal muscle tissue	UBERON:0001134	52.35	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	51.70	gold quality
Brodmann (1909) area 9	UBERON:0013540	51.53	gold quality
brain	UBERON:0000955	50.95	gold quality
anterior cingulate cortex	UBERON:0009835	50.27	gold quality
muscle of leg	UBERON:0001383	50.22	gold quality
corpus callosum	UBERON:0002336	49.94	silver quality
muscle tissue	UBERON:0002385	49.70	silver quality
rectum	UBERON:0001052	49.05	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.24

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.