LINC01931

Summary

LINC01931 (long intergenic non-protein coding RNA 1931, HGNC:52743) is a long non-coding RNA gene on chromosome 2q23.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52743
Approved symbol	LINC01931
Name	long intergenic non-protein coding RNA 1931
Location	2q23.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000162947
Ensembl biotype	lncRNA
Entrez	150596
RNAcentral	URS00000658C9 — lncRNA, 1832 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 12 lncRNA

ENST00000295052, ENST00000433174, ENST00000658047, ENST00000659456, ENST00000791337, ENST00000791338, ENST00000791339, ENST00000791340, ENST00000791341, ENST00000791342, ENST00000791343, ENST00000791344

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000295052 — 5 exons

Exon	Start	End
ENSE00001070095	149857451	149858603
ENSE00001528558	149767506	149767909
ENSE00001528559	149769320	149769406
ENSE00001528561	149804182	149804220
ENSE00001528562	149859043	149859191

Expression profiles

Bgee: expression breadth broad, 79 present calls, max score 89.24.

Top tissues by expression

187 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	89.24	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.69	gold quality
sperm	CL:0000019	79.52	gold quality
buccal mucosa cell	CL:0002336	77.25	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	66.05	gold quality
colonic epithelium	UBERON:0000397	64.50	silver quality
biceps brachii	UBERON:0001507	64.10	gold quality
upper lobe of lung	UBERON:0008948	62.75	silver quality
lower lobe of lung	UBERON:0008949	62.49	silver quality
sural nerve	UBERON:0015488	62.33	gold quality
tibialis anterior	UBERON:0001385	62.15	silver quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	62.03	gold quality
quadriceps femoris	UBERON:0001377	61.82	gold quality
vastus lateralis	UBERON:0001379	61.62	gold quality
myocardium	UBERON:0002349	59.33	gold quality
deltoid	UBERON:0001476	58.60	silver quality
endothelial cell	CL:0000115	58.43	gold quality
right testis	UBERON:0004534	58.28	gold quality
ileal mucosa	UBERON:0000331	57.85	silver quality
left testis	UBERON:0004533	57.34	gold quality
testis	UBERON:0000473	57.12	gold quality
hindlimb stylopod muscle	UBERON:0004252	55.94	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
heart left ventricle	UBERON:0002084	53.82	gold quality
cerebellar vermis	UBERON:0004720	53.58	gold quality
upper arm skin	UBERON:0004263	53.52	gold quality
epithelial cell of pancreas	CL:0000083	53.42	gold quality
upper leg skin	UBERON:0004262	53.31	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.26

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.